Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Haglr-201ENSMUST00000100000 2085 ntBASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv17A0A140T8P8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv17A0A140T8P8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv17A0A140T8P8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv17A0A140T8P8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Trbv17A0A140T8P8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Gm29707-201ENSMUST00000196325 491 ntBASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv17A0A140T8P8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Dancr-204ENSMUST00000132389 2347 ntBASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Gm6623-201ENSMUST00000173570 544 ntBASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Gm23634-201ENSMUST00000175071 91 ntBASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms