Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc194A0A140LIT1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Gm45058-201ENSMUST00000205810 766 ntBASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc194A0A140LIT1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Gm7889-201ENSMUST00000185591 958 ntBASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc194A0A140LIT1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc194A0A140LIT1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc194A0A140LIT1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms