Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhgb8A0A140LI48 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhgb8A0A140LI48 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhgb8A0A140LI48 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhgb8A0A140LI48 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhgb8A0A140LI48 Gm22697-201ENSMUST00000175194 63 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms