Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5580A0A0N4SVP8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm13436-201ENSMUST00000120418 567 ntBASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5580A0A0N4SVP8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5580A0A0N4SVP8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Gm15565-201ENSMUST00000118890 427 ntBASIC17.53■□□□□ 0.4
Gm5580A0A0N4SVP8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms