Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm6376-201ENSMUST00000209407 580 ntBASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Mzt1-203ENSMUST00000227948 952 ntBASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V3A0A0G2JEW2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms