Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm12350-201ENSMUST00000121208 462 ntBASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm15173-201ENSMUST00000122049 433 ntBASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Mir5126-201ENSMUST00000175513 77 ntBASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.34■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Igkv5-43A0A0B4J1J2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm6550-201ENSMUST00000187574 993 ntBASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms