Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm28033-201ENSMUST00000184224 96 ntBASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm9103-201ENSMUST00000119371 405 ntBASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms