Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ighv1-11A0A0A6YWI9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Gm13474-201ENSMUST00000122466 815 ntBASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Gm2274-201ENSMUST00000184539 609 ntBASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ighv1-11A0A0A6YWI9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms