Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-5A0A075B6B5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gm42545-201ENSMUST00000202755 922 ntBASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-5A0A075B6B5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gm18958-201ENSMUST00000174258 762 ntBASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Phf7-203ENSMUST00000226565 1971 ntBASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Sybu-209ENSMUST00000228639 4113 ntBASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-5A0A075B6B5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms