Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-4A0A075B6B4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-4A0A075B6B4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-4A0A075B6B4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav6-4A0A075B6B4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Trav6-4A0A075B6B4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Gm7284-201ENSMUST00000131667 944 ntBASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-4A0A075B6B4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Gm27742-201ENSMUST00000184667 60 ntBASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-4A0A075B6B4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms