Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6n-6A0A075B6B2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6n-6A0A075B6B2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav6n-6A0A075B6B2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6n-6A0A075B6B2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Mir5122-201ENSMUST00000175004 89 ntBASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm37025-201ENSMUST00000195159 829 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms