Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav17A0A075B655 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Asic1-205ENSMUST00000228185 1818 ntBASIC12.81□□□□□ -0.36
Trav17A0A075B655 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Gm5643-201ENSMUST00000117081 966 ntBASIC12.81□□□□□ -0.36
Trav17A0A075B655 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.81□□□□□ -0.36
Trav17A0A075B655 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Gm10698-201ENSMUST00000182663 604 ntBASIC12.81□□□□□ -0.36
Trav17A0A075B655 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav17A0A075B655 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav17A0A075B655 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gm13186-201ENSMUST00000118031 316 ntBASIC12.79□□□□□ -0.36
Trav17A0A075B655 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.79□□□□□ -0.36
Trav17A0A075B655 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav17A0A075B655 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms