Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav12-3A0A075B648 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-3A0A075B648 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Trav12-3A0A075B648 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12-3A0A075B648 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12-3A0A075B648 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms