Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav8n-2A0A075B633 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Trav8n-2A0A075B633 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8n-2A0A075B633 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8n-2A0A075B633 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm8344-201ENSMUST00000119813 856 ntBASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm25911-201ENSMUST00000157621 56 ntBASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm10576-201ENSMUST00000191927 825 ntBASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8n-2A0A075B633 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav8n-2A0A075B633 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms