Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Dio3-201ENSMUST00000097228 1449 ntBASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6n-5A0A075B621 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gm42545-201ENSMUST00000202755 922 ntBASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6n-5A0A075B621 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gm18958-201ENSMUST00000174258 762 ntBASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Phf7-203ENSMUST00000226565 1971 ntBASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Sybu-209ENSMUST00000228639 4113 ntBASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6n-5A0A075B621 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms