Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gm7153-201ENSMUST00000117092 455 ntBASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gm13216-201ENSMUST00000117145 591 ntBASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Olfr129-201ENSMUST00000122318 993 ntBASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13d-1A0A075B606 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Gm15794-201ENSMUST00000120182 631 ntBASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Gm44450-201ENSMUST00000199528 114 ntBASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13d-1A0A075B606 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.81□□□□□ -0.52
Trav13d-1A0A075B606 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trav13d-1A0A075B606 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms