Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm29707-201ENSMUST00000196325 491 ntBASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-1A0A075B5Z8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-1A0A075B5Z8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms