Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Gm13836-201ENSMUST00000121159 501 ntBASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv4A0A075B5I2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv4A0A075B5I2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 AA414768-201ENSMUST00000121924 1257 ntBASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv4A0A075B5I2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv4A0A075B5I2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv4A0A075B5I2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms