Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC139792.2-201ENST00000624218 587 ntBASIC1.51□□□□□ -2.17
USP16Q9Y5T5 MIR3662-201ENST00000637030 95 ntBASIC1.51□□□□□ -2.17
USP16Q9Y5T5 Y_RNA.151-201ENST00000363566 112 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 MIR517A-201ENST00000385001 87 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 MIR1283-1-201ENST00000408494 87 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 MIR1277-201ENST00000408536 78 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 UBE2V1P8-201ENST00000437166 265 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.5□□□□□ -2.17
USP16Q9Y5T5 RNU6-864P-201ENST00000516256 108 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 RNA5SP54-201ENST00000516951 92 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AC016727.2-201ENST00000603988 621 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AC090617.10-201ENST00000624308 134 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 AC068137.4-201ENST00000638485 296 ntBASIC1.5□□□□□ -2.17
USP16Q9Y5T5 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 RNU5F-3P-201ENST00000363767 117 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 SNORD115-32-201ENST00000364079 82 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 SNORD116-11-201ENST00000383882 92 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 RNU6-245P-201ENST00000384020 107 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 RNY1P14-201ENST00000384426 108 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 MIR520E-201ENST00000384867 87 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC004386.2-201ENST00000441858 148 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 RNA5SP445-201ENST00000515889 115 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 MIR3672-201ENST00000584290 82 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC069114.2-201ENST00000604699 304 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AC100810.6-201ENST00000638068 285 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
USP16Q9Y5T5 AL159152.1-201ENST00000635019 2587 ntBASIC1.49□□□□□ -2.17
USP16Q9Y5T5 BX322639.1-202ENST00000423987 2213 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 SNORD115-47-201ENST00000391226 86 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RNA5SP100-201ENST00000410903 110 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RNA5SP59-201ENST00000410922 110 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 EBAG9P1-201ENST00000418955 543 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 MTCO1P44-201ENST00000441935 243 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 MTND1P11-201ENST00000456661 876 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AC010531.2-201ENST00000465012 153 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RPL23AP75-201ENST00000491601 451 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AC097473.1-201ENST00000508142 408 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RNU6-856P-201ENST00000516959 98 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 RNU1-54P-201ENST00000517181 120 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AC090821.2-201ENST00000523552 176 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.48□□□□□ -2.17
USP16Q9Y5T5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 AC083806.3-201ENST00000614016 455 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.48□□□□□ -2.17
USP16Q9Y5T5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.48□□□□□ -2.17
USP16Q9Y5T5 MTND5P9-201ENST00000503854 1755 ntBASIC1.48□□□□□ -2.17
USP16Q9Y5T5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
USP16Q9Y5T5 MIR340-201ENST00000362125 95 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 RNU6-137P-201ENST00000363680 108 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 SNORD115-8-201ENST00000363856 82 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 SNORD115-38-201ENST00000365037 82 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 MIR153-2-201ENST00000385225 87 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AL590632.1-201ENST00000424289 371 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 MTCO3P46-201ENST00000425787 232 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AC069257.2-201ENST00000441819 155 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 NFU1P2-201ENST00000448700 469 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AC079354.2-201ENST00000453523 154 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 RNU6-498P-201ENST00000459468 107 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AC067942.3-201ENST00000512025 362 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 RNU6-948P-201ENST00000516374 107 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.47□□□□□ -2.17
USP16Q9Y5T5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.47□□□□□ -2.17
USP16Q9Y5T5 AC006504.8-201ENST00000621046 635 ntBASIC1.47□□□□□ -2.17
USP16Q9Y5T5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USP16Q9Y5T5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
USP16Q9Y5T5 RNU6-545P-201ENST00000362681 104 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 SNORD50.1-201ENST00000362987 71 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 MIR586-201ENST00000385035 97 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USP16Q9Y5T5 FCF1P9-201ENST00000412546 282 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 EIF1P1-201ENST00000421436 341 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
USP16Q9Y5T5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.46□□□□□ -2.18
USP16Q9Y5T5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.46□□□□□ -2.18
USP16Q9Y5T5 RNU6-344P-201ENST00000516635 111 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.46□□□□□ -2.18
USP16Q9Y5T5 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 AC073869.6-201ENST00000640656 341 ntBASIC1.46□□□□□ -2.18
USP16Q9Y5T5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms