Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR5694-201ENST00000581190 76 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 ZNF204P-201ENST00000416749 2397 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.389-201ENST00000383924 113 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.485-201ENST00000384395 102 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 SNORA11.4-201ENST00000408823 129 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.597-201ENST00000410463 100 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 EIF1P2-201ENST00000428233 350 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 CBX3P6-201ENST00000430257 527 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 AL603825.1-201ENST00000438481 80 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 MTCO3P8-201ENST00000453691 755 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 RPL23AP42-201ENST00000471152 471 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 RNU6-327P-201ENST00000516270 127 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 AL442163.3-201ENST00000554110 156 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 AC090517.1-201ENST00000569307 266 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 MIR4680-201ENST00000580906 66 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 AL360085.1-201ENST00000604713 532 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 AL162373.1-201ENST00000620433 407 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 MIR6132-201ENST00000622083 109 ntBASIC3.46□□□□□ -1.86
CDK11AQ9UQ88 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNU1-23P-201ENST00000363361 144 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.145-201ENST00000363527 102 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNU6-879P-201ENST00000364328 108 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNU6-738P-201ENST00000384531 106 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 MIR10B-201ENST00000385011 110 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNU6-1045P-201ENST00000516321 107 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 RNA5SP137-201ENST00000516833 135 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 AC034114.1-201ENST00000520293 285 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
CDK11AQ9UQ88 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.27-201ENST00000362540 103 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 SNORA6-201ENST00000384033 151 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 MIR1294-201ENST00000408503 142 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 RNU6-985P-201ENST00000410182 104 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 SNORA4.4-201ENST00000515921 135 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 SNORA25.14-201ENST00000516481 132 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 SCARNA16.3-201ENST00000516595 184 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 RNA5SP402-201ENST00000517148 110 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 AC078899.2-201ENST00000595282 212 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 AC005562.2-201ENST00000618264 111 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 AC009831.4-201ENST00000620744 325 ntBASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDK11AQ9UQ88 RNU4-50P-201ENST00000364361 141 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 SNORA63C-201ENST00000364578 129 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.455-201ENST00000384230 98 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 RNY3P4-201ENST00000384428 101 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 RNU6-1274P-201ENST00000384557 107 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 MIR487A-201ENST00000385009 80 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.645-201ENST00000391229 102 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 RNU6-764P-201ENST00000516396 105 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 AC040926.1-201ENST00000530195 238 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 UBL5P4-201ENST00000562584 236 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 AC104695.3-201ENST00000604052 296 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 AC124312.5-201ENST00000604451 268 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 TCL6_2.1-201ENST00000615162 119 ntBASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDK11AQ9UQ88 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 RNU6-873P-201ENST00000363833 107 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 SNORD32B-201ENST00000364460 84 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 SNORA63.7-201ENST00000365579 123 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.380-201ENST00000365663 111 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 RNU6-281P-201ENST00000384212 103 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 SNORA67.3-201ENST00000384366 140 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 SNORA51.11-201ENST00000384442 131 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 MIR144-201ENST00000384886 86 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 CR769767.1-201ENST00000436337 346 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 U8.22-201ENST00000459141 133 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 AC018868.1-201ENST00000491307 315 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 SNORA31.25-201ENST00000517242 134 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 AC093023.1-201ENST00000547375 507 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 AC026271.5-201ENST00000577873 130 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 MIR4529-201ENST00000578110 78 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 AL137847.3-201ENST00000611521 109 ntBASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CDK11AQ9UQ88 ZNF355P-201ENST00000427301 3216 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 RNU6-1301P-201ENST00000362724 104 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.527-201ENST00000384573 102 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 RNA5SP213-201ENST00000391031 106 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 RNU6-823P-201ENST00000391042 103 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 SNORA12-201ENST00000391162 147 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 MTND2P23-201ENST00000422990 651 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 AC027124.2-201ENST00000428249 105 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 HMGN2P23-201ENST00000456759 269 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 Y_RNA.720-201ENST00000517166 92 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 CYCSP23-201ENST00000519781 313 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 AC018630.3-201ENST00000542637 96 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms