Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC100830.2-201ENST00000581636 240 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 FAM157A-202ENST00000615155 405 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 AC006001.4-201ENST00000622243 395 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.318-201ENST00000365131 97 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.436-201ENST00000384097 102 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.481-201ENST00000384373 102 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 MIR521-1-201ENST00000384902 87 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 MIR320B2-201ENST00000408479 138 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 RNU6-1068P-201ENST00000410958 103 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 MTCO1P20-201ENST00000425366 358 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH9Q9ULB4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.21□□□□□ -2.22
CDH9Q9ULB4 MTCO2P7-201ENST00000446518 666 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 AC105313.1-201ENST00000509121 353 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 AF250324.2-201ENST00000608299 610 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 AC137590.2-201ENST00000619709 240 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 SCARNA4-201ENST00000629045 128 ntBASIC1.21□□□□□ -2.22
CDH9Q9ULB4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CDH9Q9ULB4 RNU6-483P-201ENST00000384088 108 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU6-933P-201ENST00000384424 107 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU6-417P-201ENST00000384712 107 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 SNRPEP10-201ENST00000420249 274 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU7-57P-201ENST00000459540 60 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RPS26P45-201ENST00000471748 340 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC107401.1-201ENST00000503426 685 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC024995.1-201ENST00000523014 93 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 MTND1P35-201ENST00000526739 508 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 AC080078.3-201ENST00000605407 463 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU6-89P-201ENST00000606519 100 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.2□□□□□ -2.22
CDH9Q9ULB4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
CDH9Q9ULB4 RNU6-451P-201ENST00000362921 107 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 RNU1-22P-201ENST00000363334 158 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 RNU6-1085P-201ENST00000363576 107 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.372-201ENST00000365599 102 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.517-201ENST00000384551 106 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 SNORD116-4-201ENST00000384733 96 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 MIR1253-201ENST00000408273 105 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH9Q9ULB4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH9Q9ULB4 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH9Q9ULB4 HMGN1P12-201ENST00000499125 195 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.704-201ENST00000516851 102 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AL442163.3-201ENST00000554110 156 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH9Q9ULB4 MIR4742-201ENST00000581069 85 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AL365434.2-201ENST00000607979 234 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC097065.2-201ENST00000608159 533 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 MIR8070-201ENST00000616510 88 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC073534.2-201ENST00000620377 381 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AL078596.1-201ENST00000624856 447 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC008873.1-201ENST00000625051 138 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC068137.3-201ENST00000639191 341 ntBASIC1.19□□□□□ -2.22
CDH9Q9ULB4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH9Q9ULB4 AC121333.1-201ENST00000567488 2709 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.38-201ENST00000362617 102 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 SNORA67.2-201ENST00000384300 149 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 MIR450B-201ENST00000401182 78 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 MTND1P1-201ENST00000445453 368 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH9Q9ULB4 RNU7-66P-201ENST00000459469 62 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 COX6CP14-201ENST00000469580 174 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 RPL23AP75-201ENST00000491601 451 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AL512360.1-201ENST00000555346 234 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 EIF1P4-201ENST00000572664 335 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AC146944.4-201ENST00000602697 718 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH9Q9ULB4 AC040896.1-201ENST00000613819 479 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 snoZ196.1-201ENST00000625269 89 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 ZNF204P-201ENST00000416749 2397 ntBASIC1.18□□□□□ -2.22
CDH9Q9ULB4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.231-201ENST00000364358 102 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 Y_RNA.256-201ENST00000364594 104 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 RNU6-1042P-201ENST00000384204 107 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 RNA5SP323-201ENST00000391094 133 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 RNA5SP467-201ENST00000391274 118 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH9Q9ULB4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
CDH9Q9ULB4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH9Q9ULB4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms