Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 SNORA25.10-201ENST00000515926 124 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 RNU6-988P-201ENST00000519081 107 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 AL442663.2-201ENST00000554385 511 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.2□□□□□ -2.06
UPF2Q9HAU5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.2□□□□□ -2.06
UPF2Q9HAU5 AL355297.2-201ENST00000604792 129 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 AC100812.1-201ENST00000607622 580 ntBASIC2.2□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.158-201ENST00000363651 101 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 SNORD32B-201ENST00000364460 84 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNA5SP240-201ENST00000365355 128 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNU6-318P-201ENST00000384283 103 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNU1-139P-201ENST00000391307 165 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC007098.1-201ENST00000420122 367 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 HMGN1P10-201ENST00000474557 553 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNU6-1046P-201ENST00000516538 107 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.15-201ENST00000611544 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.16-201ENST00000613119 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.12-201ENST00000613778 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.20-201ENST00000613956 192 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.9-201ENST00000615427 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.11-201ENST00000616345 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.2-201ENST00000616535 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.3-201ENST00000617785 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.19-201ENST00000618602 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 RNU2-1-201ENST00000618664 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.6-201ENST00000619225 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.5-201ENST00000619465 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 U2.10-201ENST00000620268 191 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC091932.3-201ENST00000624223 323 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 AC005592.1-201ENST00000566527 1640 ntBASIC2.19□□□□□ -2.06
UPF2Q9HAU5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UPF2Q9HAU5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.153-201ENST00000363615 91 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 RNU6-450P-201ENST00000364654 107 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.319-201ENST00000365138 92 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 RNU6-26P-201ENST00000383985 107 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.527-201ENST00000384573 102 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 MIR625-201ENST00000385047 85 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 SNORA69.1-201ENST00000390904 137 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 RNU6-159P-201ENST00000391080 106 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 MIR208B-201ENST00000401172 77 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AL590556.1-201ENST00000423231 483 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC107032.1-201ENST00000485945 480 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC132942.1-201ENST00000486753 483 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.706-201ENST00000516933 99 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC006600.1-201ENST00000572529 153 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AC090617.3-201ENST00000573670 475 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 MIR4298-201ENST00000584380 73 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 AL132822.1-201ENST00000617063 513 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.18□□□□□ -2.06
UPF2Q9HAU5 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNA5SP361-201ENST00000362686 118 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNU6-1301P-201ENST00000362724 104 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.162-201ENST00000363683 102 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNU6-281P-201ENST00000384212 103 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 MIR95-201ENST00000385072 81 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNU6-823P-201ENST00000391042 103 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 U8.20-201ENST00000459445 131 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 AC010469.2-201ENST00000496412 480 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNU6-475P-201ENST00000516073 104 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 RNU7-4P-201ENST00000516961 62 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 MIR3923-201ENST00000579521 83 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 U2.1-201ENST00000618978 145 ntBASIC2.17□□□□□ -2.06
UPF2Q9HAU5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPF2Q9HAU5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPF2Q9HAU5 Y_RNA.39-201ENST00000362620 98 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU6-873P-201ENST00000363833 107 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU6-639P-201ENST00000384074 107 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 SNORA70B-201ENST00000384210 135 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU1-148P-201ENST00000384472 162 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 MIR676-201ENST00000390702 67 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU6-1093P-201ENST00000391194 107 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU6-985P-201ENST00000410182 104 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.16□□□□□ -2.06
UPF2Q9HAU5 AL445685.2-201ENST00000422551 342 ntBASIC2.16□□□□□ -2.06
UPF2Q9HAU5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPF2Q9HAU5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.16□□□□□ -2.06
UPF2Q9HAU5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.16□□□□□ -2.06
UPF2Q9HAU5 RNU7-87P-201ENST00000459343 62 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms