Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 Y_RNA.339-201ENST00000365325 102 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNU6-338P-201ENST00000383888 105 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 SNORA67.2-201ENST00000384300 149 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 Y_RNA.482-201ENST00000384377 111 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNU6-57P-201ENST00000411348 103 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 AL139156.1-201ENST00000412785 841 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 AC099677.2-201ENST00000436385 175 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.61□□□□□ -2.15
SSX3Q99909 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.61□□□□□ -2.15
SSX3Q99909 AP000870.1-201ENST00000472927 406 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 Y_RNA.670-201ENST00000516255 105 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RNA5SP384-201ENST00000516615 116 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 AC100812.1-201ENST00000607622 580 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
SSX3Q99909 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.61□□□□□ -2.15
SSX3Q99909 MTND4P12-201ENST00000498999 1377 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 RNU6-112P-201ENST00000363599 104 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 RNU2-2P-201ENST00000410396 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.6□□□□□ -2.15
SSX3Q99909 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.6□□□□□ -2.15
SSX3Q99909 AL355802.3-201ENST00000607571 545 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 AC009229.3-201ENST00000608056 282 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
SSX3Q99909 U2.15-201ENST00000611544 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 uc_338.5-201ENST00000611839 155 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.16-201ENST00000613119 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.12-201ENST00000613778 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.20-201ENST00000613956 192 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.9-201ENST00000615427 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.11-201ENST00000616345 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.2-201ENST00000616535 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 PISRT1.1-201ENST00000616930 107 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.3-201ENST00000617785 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.19-201ENST00000618602 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 RNU2-1-201ENST00000618664 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.6-201ENST00000619225 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.5-201ENST00000619465 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 U2.10-201ENST00000620268 191 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 AC006001.4-201ENST00000622243 395 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
SSX3Q99909 AC068205.3-201ENST00000636385 468 ntBASIC1.6□□□□□ -2.15
SSX3Q99909 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
SSX3Q99909 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SSX3Q99909 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SSX3Q99909 Y_RNA.88-201ENST00000363029 99 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNU6-727P-201ENST00000363592 107 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 Y_RNA.184-201ENST00000363884 108 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNU6-793P-201ENST00000384233 104 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNU6-700P-201ENST00000391043 107 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 FGF7P8-201ENST00000402994 292 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNA5SP504-201ENST00000410676 117 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
SSX3Q99909 AC007098.1-201ENST00000420122 367 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 MTND3P23-201ENST00000431980 347 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 AC103851.1-201ENST00000506833 274 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 RNU6-1146P-201ENST00000516282 102 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.59□□□□□ -2.15
SSX3Q99909 MIR5695-201ENST00000579717 85 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 AC126177.8-201ENST00000618339 1015 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 snoZ196.1-201ENST00000625269 89 ntBASIC1.59□□□□□ -2.15
SSX3Q99909 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.59□□□□□ -2.16
SSX3Q99909 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.16
SSX3Q99909 Y_RNA.166-201ENST00000363730 102 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 Y_RNA.179-201ENST00000363844 90 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 RNU6-1019P-201ENST00000364424 107 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 SNORD87-201ENST00000364849 89 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 MIR10B-201ENST00000385011 110 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SSX3Q99909 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 MIR1253-201ENST00000408273 105 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 RNU2-7P-201ENST00000410794 178 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 USP9YP16-201ENST00000430287 407 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 MTND3P10-201ENST00000450967 341 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 USP9YP23-201ENST00000455085 407 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 AC091179.3-201ENST00000474761 144 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 RPL7P42-201ENST00000481005 679 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 AC025465.3-201ENST00000510570 311 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.58□□□□□ -2.16
SSX3Q99909 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 AC005014.2-201ENST00000607795 599 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
SSX3Q99909 MIR338-201ENST00000636369 67 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 AC099654.5-201ENST00000636479 350 ntBASIC1.58□□□□□ -2.16
SSX3Q99909 snoU2-30.2-201ENST00000362805 70 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 RNY1P16-201ENST00000363063 111 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 Y_RNA.415-201ENST00000384012 112 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
SSX3Q99909 CST2P1-201ENST00000425770 87 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms