Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RNU6-137P-201ENST00000363680 108 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU4-42P-201ENST00000364738 142 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 SNORD42.2-201ENST00000365570 69 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.415-201ENST00000384012 112 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU6-418P-201ENST00000384035 107 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU6-926P-201ENST00000384075 107 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU6-708P-201ENST00000384217 107 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 RNU6-793P-201ENST00000384233 104 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 MIR628-201ENST00000385229 95 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AC139712.2-201ENST00000424302 339 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AL160004.2-201ENST00000432935 350 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AC016717.1-201ENST00000448918 286 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 MRPS17P9-201ENST00000511924 393 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.701-201ENST00000516812 110 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 SNRPGP18-201ENST00000553000 214 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AC006600.1-201ENST00000572529 153 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 AC007336.1-201ENST00000576365 3828 ntBASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
SH3KBP1Q96B97 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.11-201ENST00000362375 109 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 SNORD31B-201ENST00000364977 69 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 RNU6-245P-201ENST00000384020 107 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 RNY1P14-201ENST00000384426 108 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 MIR29C-201ENST00000385231 88 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 RNA5SP213-201ENST00000391031 106 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 AL137792.2-201ENST00000443484 235 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 AC007677.1-201ENST00000445757 515 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 UBE2V1P7-201ENST00000446395 340 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 RNU6-107P-201ENST00000516643 102 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 AP005660.1-201ENST00000522972 293 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 MIR4524B-201ENST00000581569 115 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 MIR4769-201ENST00000584126 77 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 AL096840.1-201ENST00000603287 93 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 U2.1-201ENST00000618978 145 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 MTND5P35-201ENST00000557537 1720 ntBASIC2.3□□□□□ -2.04
SH3KBP1Q96B97 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 RNU5F-3P-201ENST00000363767 117 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 RNU6-694P-201ENST00000364071 147 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.216-201ENST00000364205 93 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 SNORD14D-201ENST00000384390 87 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 MIR504-201ENST00000385065 83 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AL078595.1-201ENST00000404458 226 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 SNORA3.2-201ENST00000408221 125 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 MIR1283-1-201ENST00000408494 87 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AL353689.1-201ENST00000438895 199 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.639-201ENST00000458981 102 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 RNU6-237P-201ENST00000515985 71 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 RNA5SP281-201ENST00000516504 135 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 SNORD11B-201ENST00000607707 90 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 AC138305.3-201ENST00000624988 240 ntBASIC2.29□□□□□ -2.04
SH3KBP1Q96B97 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 SNORD114-6-201ENST00000364393 72 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 Y_RNA.252-201ENST00000364556 101 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 RNU6-318P-201ENST00000384283 103 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 MIR329-1-201ENST00000385028 80 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 RNA5SP504-201ENST00000410676 117 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AL158823.1-201ENST00000418441 478 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 Z98742.3-201ENST00000418637 326 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AC123900.1-201ENST00000420390 96 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AC018865.2-201ENST00000423631 129 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 RN7SKP295-201ENST00000517264 153 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 HSBP1P1-201ENST00000555205 166 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AL357075.2-201ENST00000614906 189 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
SH3KBP1Q96B97 RNU1-62P-201ENST00000362599 164 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 Y_RNA.39-201ENST00000362620 98 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 RNU6-1301P-201ENST00000362724 104 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 MIR300-201ENST00000401138 83 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 AL354751.2-201ENST00000415471 210 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 PMCHL1-202ENST00000423102 261 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 BX510359.4-201ENST00000423750 193 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 MTND1P14-201ENST00000427400 950 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 Y_RNA.631-201ENST00000459607 101 ntBASIC2.27□□□□□ -2.05
SH3KBP1Q96B97 HMGN2P9-201ENST00000476875 229 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms