Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC019205.3-201ENST00000424573 156 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC078809.1-201ENST00000427601 140 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC016700.2-201ENST00000446011 156 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MTND1P11-201ENST00000456661 876 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC015911.1-201ENST00000495111 156 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC116353.2-201ENST00000505332 712 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC096745.1-201ENST00000509945 370 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MTND4LP26-201ENST00000518144 282 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC008269.2-201ENST00000561915 1105 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 UBL5P4-201ENST00000562584 236 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC080078.2-201ENST00000603766 501 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC005520.5-201ENST00000613926 164 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 SNORD115-3-201ENST00000363100 82 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.212-201ENST00000364177 102 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 RNU1-78P-201ENST00000391248 165 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC243428.1-201ENST00000421099 264 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AL133396.1-201ENST00000432048 687 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 MTND1P4-201ENST00000435196 415 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC245102.2-201ENST00000448956 180 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 PCMTD1P1-201ENST00000455560 355 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 RPS29P23-201ENST00000458635 123 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 snoU13.30-201ENST00000458951 104 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 RPS23P5-201ENST00000495419 428 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 HMGN1P12-201ENST00000499125 195 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC091874.1-201ENST00000511402 339 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 ACA59.1-201ENST00000515966 143 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC243960.4-201ENST00000600532 288 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 AC002553.4-201ENST00000616896 331 ntBASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHROOM3Q8TF72 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 MIR373-201ENST00000362273 69 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.123-201ENST00000363338 102 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.135-201ENST00000363439 95 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.301-201ENST00000364990 103 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1274P-201ENST00000384557 107 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 MTND3P23-201ENST00000431980 347 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC079354.2-201ENST00000453523 154 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 SNORA48.11-201ENST00000517015 89 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC018638.8-201ENST00000588755 281 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC103810.8-201ENST00000607347 118 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.68-201ENST00000362881 102 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.404-201ENST00000383978 102 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 RNU6-245P-201ENST00000384020 107 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 SNORA70.7-201ENST00000384159 133 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.573-201ENST00000384763 105 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1156P-201ENST00000410365 100 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 RPL37P10-201ENST00000412884 288 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC092989.1-201ENST00000481235 277 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AC018630.3-201ENST00000542637 96 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AL078605.1-201ENST00000603529 500 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 SNRPGP17-201ENST00000603780 214 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AP000654.2-201ENST00000605633 586 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 AL138726.1-201ENST00000614873 333 ntBASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.12□□□□□ -2.23
SHROOM3Q8TF72 ZNF204P-201ENST00000416749 2397 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1188P-201ENST00000363795 107 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 SNORD116-29-201ENST00000384516 83 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MIR193B-201ENST00000384907 83 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MIR10B-201ENST00000385011 110 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MTCYBP2-201ENST00000407745 171 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MIR548F5-201ENST00000408421 86 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 UBE2V1P4-201ENST00000425374 344 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 USMG5P1-201ENST00000425964 177 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 RPS3AP52-201ENST00000435639 297 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 Z82188.1-201ENST00000436709 154 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC055731.1-201ENST00000474387 401 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC093259.1-201ENST00000509755 300 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AF235103.2-201ENST00000525753 346 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC115990.1-201ENST00000526957 301 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 CBX3P8-201ENST00000532412 525 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MIR5696-201ENST00000578474 85 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AL356157.2-201ENST00000605122 111 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 AC124303.1-201ENST00000605703 360 ntBASIC1.11□□□□□ -2.23
SHROOM3Q8TF72 MIR3976-201ENST00000606807 139 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms