Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MTND2P38-201ENST00000522536 667 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CDH17Q12864 AC015688.6-201ENST00000577737 104 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 PIGPP4-201ENST00000584447 307 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH17Q12864 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH17Q12864 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 AL359697.1-201ENST00000624879 587 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 SCARNA4-201ENST00000629045 128 ntBASIC1.11□□□□□ -2.23
CDH17Q12864 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 Y_RNA.372-201ENST00000365599 102 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 SNORA67.2-201ENST00000384300 149 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH17Q12864 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH17Q12864 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH17Q12864 SEPT14P3-201ENST00000439401 183 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 AL732372.2-207ENST00000445840 183 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 SEPT14P2-201ENST00000453405 183 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 SEPT14P4-201ENST00000513445 186 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 FO082796.1-201ENST00000523795 183 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 MTND1P35-201ENST00000526739 508 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH17Q12864 AP003465.2-201ENST00000602571 373 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 AC092954.2-201ENST00000609103 430 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 AL133215.3-201ENST00000609801 448 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH17Q12864 AC006001.4-201ENST00000622243 395 ntBASIC1.1□□□□□ -2.23
CDH17Q12864 MTND4P5-201ENST00000435821 1374 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDH17Q12864 snoU2-30.2-201ENST00000362805 70 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 SNORD50.1-201ENST00000362987 71 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 RNU6-483P-201ENST00000384088 108 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 SNORD116-2-201ENST00000384274 95 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 RNU6-933P-201ENST00000384424 107 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 SNORD116-6-201ENST00000384711 96 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 MIR194-1-201ENST00000384892 85 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 MIR586-201ENST00000385035 97 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 RNU6-908P-201ENST00000410160 94 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH17Q12864 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH17Q12864 HMGN2P34-201ENST00000437647 269 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC073910.1-201ENST00000445047 438 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.09□□□□□ -2.23
CDH17Q12864 RNU7-187P-201ENST00000458985 68 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 snoU13.27-201ENST00000459278 104 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC114982.1-201ENST00000469402 321 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 Y_RNA.665-201ENST00000516177 98 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 RNU6-1281P-201ENST00000516223 105 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 Y_RNA.704-201ENST00000516851 102 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH17Q12864 AC016957.1-201ENST00000534895 309 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 NBR2-204ENST00000587322 63 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC010525.2-201ENST00000590920 195 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 DISC2.1-201ENST00000612827 205 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 AC137590.2-201ENST00000619709 240 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
CDH17Q12864 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDH17Q12864 RNU6-1305P-201ENST00000364353 104 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 Y_RNA.373-201ENST00000365600 103 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 RNU6-128P-201ENST00000383976 107 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 RNU2-16P-201ENST00000410712 136 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 Y_RNA.615-201ENST00000410769 117 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH17Q12864 AC079354.2-201ENST00000453523 154 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 RNU7-57P-201ENST00000459540 60 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
CDH17Q12864 AL163195.1-201ENST00000496941 348 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.08□□□□□ -2.24
CDH17Q12864 AL162413.1-201ENST00000603198 110 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 ZNF204P-201ENST00000416749 2397 ntBASIC1.08□□□□□ -2.24
CDH17Q12864 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
CDH17Q12864 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CDH17Q12864 RNA5SP327-201ENST00000362494 101 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 Y_RNA.287-201ENST00000364853 94 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDH17Q12864 RNU6-57P-201ENST00000411348 103 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 MTND1P11-201ENST00000456661 876 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
CDH17Q12864 CYP3A52P-201ENST00000563326 91 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 MIR4742-201ENST00000581069 85 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 AC008873.1-201ENST00000625051 138 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
CDH17Q12864 AC027514.1-201ENST00000588561 1603 ntBASIC1.07□□□□□ -2.24
CDH17Q12864 RNU6-1252P-201ENST00000363054 104 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 Y_RNA.151-201ENST00000363566 112 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 RNU6-95P-201ENST00000384697 107 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 RNU6-417P-201ENST00000384712 107 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 RNA5SP504-201ENST00000410676 117 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
CDH17Q12864 AC016909.1-201ENST00000415916 166 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 AL353572.1-201ENST00000442490 417 ntBASIC1.06□□□□□ -2.24
CDH17Q12864 HMGN2P26-201ENST00000463169 339 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms