Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
RORAP35398 AC016957.1-201ENST00000534895 309 ntBASIC1.22□□□□□ -2.21
RORAP35398 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.22□□□□□ -2.21
RORAP35398 AC026371.1-201ENST00000551867 419 ntBASIC1.22□□□□□ -2.21
RORAP35398 MIR4742-201ENST00000581069 85 ntBASIC1.22□□□□□ -2.21
RORAP35398 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
RORAP35398 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
RORAP35398 RNU6-1252P-201ENST00000363054 104 ntBASIC1.21□□□□□ -2.22
RORAP35398 Y_RNA.151-201ENST00000363566 112 ntBASIC1.21□□□□□ -2.22
RORAP35398 SNORA25.9-201ENST00000365087 128 ntBASIC1.21□□□□□ -2.22
RORAP35398 SNORA4.2-201ENST00000365313 147 ntBASIC1.21□□□□□ -2.22
RORAP35398 Y_RNA.559-201ENST00000384686 107 ntBASIC1.21□□□□□ -2.22
RORAP35398 RNU6-95P-201ENST00000384697 107 ntBASIC1.21□□□□□ -2.22
RORAP35398 MIR1276-201ENST00000408707 83 ntBASIC1.21□□□□□ -2.22
RORAP35398 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.21□□□□□ -2.22
RORAP35398 NDUFA5P4-201ENST00000436704 385 ntBASIC1.21□□□□□ -2.22
RORAP35398 Z82188.1-201ENST00000436709 154 ntBASIC1.21□□□□□ -2.22
RORAP35398 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
RORAP35398 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
RORAP35398 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.21□□□□□ -2.22
RORAP35398 MTND1P35-201ENST00000526739 508 ntBASIC1.21□□□□□ -2.22
RORAP35398 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
RORAP35398 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.21□□□□□ -2.22
RORAP35398 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.21□□□□□ -2.22
RORAP35398 AC005668.1-201ENST00000571142 476 ntBASIC1.21□□□□□ -2.22
RORAP35398 AL162413.1-201ENST00000603198 110 ntBASIC1.21□□□□□ -2.22
RORAP35398 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.21□□□□□ -2.22
RORAP35398 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.21□□□□□ -2.22
RORAP35398 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.21□□□□□ -2.22
RORAP35398 Y_RNA.287-201ENST00000364853 94 ntBASIC1.2□□□□□ -2.22
RORAP35398 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
RORAP35398 RNU6-933P-201ENST00000384424 107 ntBASIC1.2□□□□□ -2.22
RORAP35398 MIR194-1-201ENST00000384892 85 ntBASIC1.2□□□□□ -2.22
RORAP35398 MIR586-201ENST00000385035 97 ntBASIC1.2□□□□□ -2.22
RORAP35398 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.2□□□□□ -2.22
RORAP35398 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
RORAP35398 MTCO3P18-201ENST00000440206 761 ntBASIC1.2□□□□□ -2.22
RORAP35398 MTND2P22-201ENST00000444325 1033 ntBASIC1.2□□□□□ -2.22
RORAP35398 Z83846.1-201ENST00000446798 265 ntBASIC1.2□□□□□ -2.22
RORAP35398 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.2□□□□□ -2.22
RORAP35398 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
RORAP35398 RNU6-948P-201ENST00000516374 107 ntBASIC1.2□□□□□ -2.22
RORAP35398 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
RORAP35398 MIR3937-201ENST00000580135 106 ntBASIC1.2□□□□□ -2.22
RORAP35398 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.2□□□□□ -2.22
RORAP35398 AF250324.2-201ENST00000608299 610 ntBASIC1.2□□□□□ -2.22
RORAP35398 DISC2.1-201ENST00000612827 205 ntBASIC1.2□□□□□ -2.22
RORAP35398 AL138726.1-201ENST00000614873 333 ntBASIC1.2□□□□□ -2.22
RORAP35398 AC008873.1-201ENST00000625051 138 ntBASIC1.2□□□□□ -2.22
RORAP35398 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
RORAP35398 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RORAP35398 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RORAP35398 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
RORAP35398 ZNF204P-201ENST00000416749 2397 ntBASIC1.19□□□□□ -2.22
RORAP35398 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
RORAP35398 Y_RNA.135-201ENST00000363439 95 ntBASIC1.19□□□□□ -2.22
RORAP35398 RNY3P3-201ENST00000363816 102 ntBASIC1.19□□□□□ -2.22
RORAP35398 Y_RNA.194-201ENST00000363985 102 ntBASIC1.19□□□□□ -2.22
RORAP35398 RNU6-1090P-201ENST00000364065 94 ntBASIC1.19□□□□□ -2.22
RORAP35398 SNORA72.2-201ENST00000365028 127 ntBASIC1.19□□□□□ -2.22
RORAP35398 Y_RNA.373-201ENST00000365600 103 ntBASIC1.19□□□□□ -2.22
RORAP35398 RNU6-128P-201ENST00000383976 107 ntBASIC1.19□□□□□ -2.22
RORAP35398 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.19□□□□□ -2.22
RORAP35398 AC073910.1-201ENST00000445047 438 ntBASIC1.19□□□□□ -2.22
RORAP35398 MTCO2P7-201ENST00000446518 666 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC074290.1-201ENST00000448883 135 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.19□□□□□ -2.22
RORAP35398 MTND1P5-201ENST00000517906 940 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC024909.2-201ENST00000553035 286 ntBASIC1.19□□□□□ -2.22
RORAP35398 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.19□□□□□ -2.22
RORAP35398 AC015688.6-201ENST00000577737 104 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC073413.2-201ENST00000604332 360 ntBASIC1.19□□□□□ -2.22
RORAP35398 AC048344.4-201ENST00000619744 527 ntBASIC1.19□□□□□ -2.22
RORAP35398 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.19□□□□□ -2.22
RORAP35398 MTND4P5-201ENST00000435821 1374 ntBASIC1.19□□□□□ -2.22
RORAP35398 RNU6-1305P-201ENST00000364353 104 ntBASIC1.18□□□□□ -2.22
RORAP35398 RPL37P10-201ENST00000412884 288 ntBASIC1.18□□□□□ -2.22
RORAP35398 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.18□□□□□ -2.22
RORAP35398 DLGAP5P1-201ENST00000430307 464 ntBASIC1.18□□□□□ -2.22
RORAP35398 AC027119.1-201ENST00000440877 241 ntBASIC1.18□□□□□ -2.22
RORAP35398 MTND1P1-201ENST00000445453 368 ntBASIC1.18□□□□□ -2.22
RORAP35398 snoU13.27-201ENST00000459278 104 ntBASIC1.18□□□□□ -2.22
RORAP35398 RPL30P7-201ENST00000479312 323 ntBASIC1.18□□□□□ -2.22
RORAP35398 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.18□□□□□ -2.22
RORAP35398 AK6P2-201ENST00000549020 471 ntBASIC1.18□□□□□ -2.22
RORAP35398 MIR3672-201ENST00000584290 82 ntBASIC1.18□□□□□ -2.22
RORAP35398 SNRPGP20-201ENST00000604477 205 ntBASIC1.18□□□□□ -2.22
RORAP35398 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.18□□□□□ -2.22
RORAP35398 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.18□□□□□ -2.22
RORAP35398 AC006001.4-201ENST00000622243 395 ntBASIC1.18□□□□□ -2.22
RORAP35398 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
RORAP35398 MIR1321-201ENST00000637766 79 ntBASIC1.18□□□□□ -2.22
RORAP35398 SNORD115-8-201ENST00000363856 82 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU4-24P-201ENST00000364565 139 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU6-534P-201ENST00000364877 106 ntBASIC1.17□□□□□ -2.22
RORAP35398 SNORD115-38-201ENST00000365037 82 ntBASIC1.17□□□□□ -2.22
RORAP35398 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
RORAP35398 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
RORAP35398 MIR320B2-201ENST00000408479 138 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms