Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA1P27694 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
RPA1P27694 MTCO3P29-201ENST00000432119 779 ntBASIC1.64□□□□□ -2.15
RPA1P27694 MTATP6P23-201ENST00000440153 476 ntBASIC1.64□□□□□ -2.15
RPA1P27694 MTND4LP16-201ENST00000440828 295 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AL357134.1-201ENST00000445848 426 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC010409.1-201ENST00000487382 476 ntBASIC1.64□□□□□ -2.15
RPA1P27694 PRDX4P1-201ENST00000507189 574 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-277P-201ENST00000516272 106 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU6-875P-201ENST00000516488 106 ntBASIC1.64□□□□□ -2.15
RPA1P27694 RNU2-34P-201ENST00000516534 121 ntBASIC1.64□□□□□ -2.15
RPA1P27694 SNORA31.17-201ENST00000516953 127 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA1P27694 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.64□□□□□ -2.15
RPA1P27694 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC090517.1-201ENST00000569307 266 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC016727.2-201ENST00000603988 621 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC016727.1-205ENST00000605437 569 ntBASIC1.64□□□□□ -2.15
RPA1P27694 AC124303.1-201ENST00000605703 360 ntBASIC1.64□□□□□ -2.15
RPA1P27694 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA1P27694 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
RPA1P27694 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA1P27694 TPTEP1-208ENST00000636884 213 ntBASIC1.64□□□□□ -2.15
RPA1P27694 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.64□□□□□ -2.15
RPA1P27694 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.64□□□□□ -2.15
RPA1P27694 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
RPA1P27694 MIR340-201ENST00000362125 95 ntBASIC1.63□□□□□ -2.15
RPA1P27694 MIR424-201ENST00000362227 98 ntBASIC1.63□□□□□ -2.15
RPA1P27694 Y_RNA.70-201ENST00000362886 110 ntBASIC1.63□□□□□ -2.15
RPA1P27694 RNU6-1286P-201ENST00000383871 107 ntBASIC1.63□□□□□ -2.15
RPA1P27694 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
RPA1P27694 RNU6-360P-201ENST00000390944 104 ntBASIC1.63□□□□□ -2.15
RPA1P27694 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA1P27694 AC092473.1-201ENST00000441098 221 ntBASIC1.63□□□□□ -2.15
RPA1P27694 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPA1P27694 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.63□□□□□ -2.15
RPA1P27694 SNORD5.1-201ENST00000458800 75 ntBASIC1.63□□□□□ -2.15
RPA1P27694 RPL31P58-201ENST00000469001 379 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
RPA1P27694 Y_RNA.675-201ENST00000516389 149 ntBASIC1.63□□□□□ -2.15
RPA1P27694 Y_RNA.691-201ENST00000516611 103 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC093027.1-201ENST00000546698 429 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC026470.2-201ENST00000561492 181 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.63□□□□□ -2.15
RPA1P27694 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC016925.2-201ENST00000605108 242 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC018462.2-201ENST00000605375 395 ntBASIC1.63□□□□□ -2.15
RPA1P27694 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.63□□□□□ -2.15
RPA1P27694 AC092794.2-201ENST00000620933 563 ntBASIC1.63□□□□□ -2.15
RPA1P27694 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.63□□□□□ -2.15
RPA1P27694 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPA1P27694 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPA1P27694 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPA1P27694 RNU6-414P-201ENST00000363705 104 ntBASIC1.62□□□□□ -2.15
RPA1P27694 RNU6-968P-201ENST00000384076 107 ntBASIC1.62□□□□□ -2.15
RPA1P27694 RPS26P42-201ENST00000413485 326 ntBASIC1.62□□□□□ -2.15
RPA1P27694 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.62□□□□□ -2.15
RPA1P27694 AC098614.3-201ENST00000438957 440 ntBASIC1.62□□□□□ -2.15
RPA1P27694 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC046134.1-201ENST00000514454 666 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA1P27694 AC105029.1-201ENST00000520250 669 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPA1P27694 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.62□□□□□ -2.15
RPA1P27694 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA1P27694 MIR5696-201ENST00000578474 85 ntBASIC1.62□□□□□ -2.15
RPA1P27694 MIR548S-201ENST00000581352 82 ntBASIC1.62□□□□□ -2.15
RPA1P27694 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
RPA1P27694 AC069114.2-201ENST00000604699 304 ntBASIC1.62□□□□□ -2.15
RPA1P27694 RBM11P1-201ENST00000604951 799 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC005014.2-201ENST00000607795 599 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.62□□□□□ -2.15
RPA1P27694 AC009229.3-201ENST00000608056 282 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC025253.1-201ENST00000613623 543 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AC084781.2-201ENST00000615568 161 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
RPA1P27694 AC112487.2-201ENST00000637950 304 ntBASIC1.62□□□□□ -2.15
RPA1P27694 AL159152.1-201ENST00000635019 2587 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC245060.5-201ENST00000610778 3293 ntBASIC1.61□□□□□ -2.15
RPA1P27694 MIR126-201ENST00000362291 85 ntBASIC1.61□□□□□ -2.15
RPA1P27694 U8.1-201ENST00000362843 134 ntBASIC1.61□□□□□ -2.15
RPA1P27694 Y_RNA.166-201ENST00000363730 102 ntBASIC1.61□□□□□ -2.15
RPA1P27694 SNORD116-29-201ENST00000384516 83 ntBASIC1.61□□□□□ -2.15
RPA1P27694 Y_RNA.529-201ENST00000384586 119 ntBASIC1.61□□□□□ -2.15
RPA1P27694 MIR520A-201ENST00000384862 85 ntBASIC1.61□□□□□ -2.15
RPA1P27694 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RPA1P27694 RNU6-1093P-201ENST00000391194 107 ntBASIC1.61□□□□□ -2.15
RPA1P27694 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC007098.1-201ENST00000420122 367 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC243428.1-201ENST00000421099 264 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC108667.1-201ENST00000428618 249 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC069257.2-201ENST00000441819 155 ntBASIC1.61□□□□□ -2.15
RPA1P27694 ATP5J2P3-201ENST00000451550 258 ntBASIC1.61□□□□□ -2.15
RPA1P27694 MTCO3P10-201ENST00000455912 772 ntBASIC1.61□□□□□ -2.15
RPA1P27694 RPL36AP21-201ENST00000490372 323 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC067942.3-201ENST00000512025 362 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA1P27694 AC134698.4-201ENST00000523451 826 ntBASIC1.61□□□□□ -2.15
RPA1P27694 APOOP3-201ENST00000536787 586 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms