Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU11-5P-201ENST00000391216 129 ntBASIC1.79□□□□□ -2.12
BDNFP23560 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
BDNFP23560 MTND4LP16-201ENST00000440828 295 ntBASIC1.79□□□□□ -2.12
BDNFP23560 RN7SKP210-201ENST00000459176 261 ntBASIC1.79□□□□□ -2.12
BDNFP23560 RNU7-66P-201ENST00000459469 62 ntBASIC1.79□□□□□ -2.12
BDNFP23560 RNU7-175P-201ENST00000515915 61 ntBASIC1.79□□□□□ -2.12
BDNFP23560 AC025647.1-201ENST00000517879 253 ntBASIC1.79□□□□□ -2.12
BDNFP23560 RAB11AP2-201ENST00000545905 639 ntBASIC1.79□□□□□ -2.12
BDNFP23560 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
BDNFP23560 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.79□□□□□ -2.12
BDNFP23560 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
BDNFP23560 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.79□□□□□ -2.12
BDNFP23560 PRR13P7-201ENST00000605538 430 ntBASIC1.79□□□□□ -2.12
BDNFP23560 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
BDNFP23560 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
BDNFP23560 RNY4P14-201ENST00000363656 96 ntBASIC1.78□□□□□ -2.12
BDNFP23560 Y_RNA.490-201ENST00000384413 102 ntBASIC1.78□□□□□ -2.12
BDNFP23560 MRPL35P1-201ENST00000404272 572 ntBASIC1.78□□□□□ -2.12
BDNFP23560 USMG5P1-201ENST00000425964 177 ntBASIC1.78□□□□□ -2.12
BDNFP23560 MTCO2P7-201ENST00000446518 666 ntBASIC1.78□□□□□ -2.12
BDNFP23560 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.78□□□□□ -2.12
BDNFP23560 AC134698.4-201ENST00000523451 826 ntBASIC1.78□□□□□ -2.12
BDNFP23560 AL137100.2-201ENST00000555786 315 ntBASIC1.78□□□□□ -2.12
BDNFP23560 AC080013.6-201ENST00000606185 215 ntBASIC1.78□□□□□ -2.12
BDNFP23560 AC097065.2-201ENST00000608159 533 ntBASIC1.78□□□□□ -2.12
BDNFP23560 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.78□□□□□ -2.12
BDNFP23560 U4.5-201ENST00000617137 123 ntBASIC1.78□□□□□ -2.12
BDNFP23560 AC068137.4-201ENST00000638485 296 ntBASIC1.78□□□□□ -2.12
BDNFP23560 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
BDNFP23560 MTND5P10-201ENST00000603719 1809 ntBASIC1.77□□□□□ -2.13
BDNFP23560 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
BDNFP23560 Y_RNA.157-201ENST00000363638 102 ntBASIC1.77□□□□□ -2.13
BDNFP23560 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
BDNFP23560 RN7SKP51-201ENST00000410781 304 ntBASIC1.77□□□□□ -2.13
BDNFP23560 EIF1P1-201ENST00000421436 341 ntBASIC1.77□□□□□ -2.13
BDNFP23560 AL590632.1-201ENST00000424289 371 ntBASIC1.77□□□□□ -2.13
BDNFP23560 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
BDNFP23560 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
BDNFP23560 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
BDNFP23560 AC099513.1-201ENST00000490423 301 ntBASIC1.77□□□□□ -2.13
BDNFP23560 AL163195.1-201ENST00000496941 348 ntBASIC1.77□□□□□ -2.13
BDNFP23560 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.77□□□□□ -2.13
BDNFP23560 AC015688.6-201ENST00000577737 104 ntBASIC1.77□□□□□ -2.13
BDNFP23560 MIR3672-201ENST00000584290 82 ntBASIC1.77□□□□□ -2.13
BDNFP23560 AC022432.1-201ENST00000595739 310 ntBASIC1.77□□□□□ -2.13
BDNFP23560 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
BDNFP23560 RNU6-596P-201ENST00000365395 98 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.76□□□□□ -2.13
BDNFP23560 RNU6-793P-201ENST00000384233 104 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
BDNFP23560 MTATP6P13-201ENST00000438531 667 ntBASIC1.76□□□□□ -2.13
BDNFP23560 RNU1-54P-201ENST00000517181 120 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.76□□□□□ -2.13
BDNFP23560 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.76□□□□□ -2.13
BDNFP23560 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.76□□□□□ -2.13
BDNFP23560 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AL355802.3-201ENST00000607571 545 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AF250324.2-201ENST00000608299 610 ntBASIC1.76□□□□□ -2.13
BDNFP23560 AC024614.3-201ENST00000637860 256 ntBASIC1.76□□□□□ -2.13
BDNFP23560 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
BDNFP23560 Y_RNA.140-201ENST00000363474 103 ntBASIC1.75□□□□□ -2.13
BDNFP23560 Y_RNA.287-201ENST00000364853 94 ntBASIC1.75□□□□□ -2.13
BDNFP23560 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RNU6-17P-201ENST00000384245 107 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RNU6-18P-201ENST00000384527 107 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RNU6-331P-201ENST00000384724 107 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RN7SKP200-201ENST00000410564 320 ntBASIC1.75□□□□□ -2.13
BDNFP23560 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.75□□□□□ -2.13
BDNFP23560 AL139396.1-201ENST00000421137 167 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RPL31P58-201ENST00000469001 379 ntBASIC1.75□□□□□ -2.13
BDNFP23560 APOOP3-201ENST00000536787 586 ntBASIC1.75□□□□□ -2.13
BDNFP23560 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.75□□□□□ -2.13
BDNFP23560 AL161670.1-201ENST00000554348 137 ntBASIC1.75□□□□□ -2.13
BDNFP23560 AC040896.1-201ENST00000613819 479 ntBASIC1.75□□□□□ -2.13
BDNFP23560 AC093913.1-201ENST00000614178 329 ntBASIC1.75□□□□□ -2.13
BDNFP23560 RNU6-873P-201ENST00000363833 107 ntBASIC1.74□□□□□ -2.13
BDNFP23560 RNU6-457P-201ENST00000363999 107 ntBASIC1.74□□□□□ -2.13
BDNFP23560 Y_RNA.436-201ENST00000384097 102 ntBASIC1.74□□□□□ -2.13
BDNFP23560 RNU6-159P-201ENST00000391080 106 ntBASIC1.74□□□□□ -2.13
BDNFP23560 DLGAP5P1-201ENST00000430307 464 ntBASIC1.74□□□□□ -2.13
BDNFP23560 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.74□□□□□ -2.13
BDNFP23560 Y_RNA.638-201ENST00000459374 113 ntBASIC1.74□□□□□ -2.13
BDNFP23560 AL590705.4-201ENST00000532209 134 ntBASIC1.74□□□□□ -2.13
BDNFP23560 AC027288.2-201ENST00000553028 243 ntBASIC1.74□□□□□ -2.13
BDNFP23560 MIR5696-201ENST00000578474 85 ntBASIC1.74□□□□□ -2.13
BDNFP23560 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.74□□□□□ -2.13
BDNFP23560 AC006026.1-201ENST00000444025 1803 ntBASIC1.74□□□□□ -2.13
BDNFP23560 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
BDNFP23560 Y_RNA.179-201ENST00000363844 90 ntBASIC1.73□□□□□ -2.13
BDNFP23560 RNU6-1090P-201ENST00000364065 94 ntBASIC1.73□□□□□ -2.13
BDNFP23560 MIR194-1-201ENST00000384892 85 ntBASIC1.73□□□□□ -2.13
BDNFP23560 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
BDNFP23560 MIR1185-2-201ENST00000408687 86 ntBASIC1.73□□□□□ -2.13
BDNFP23560 Z82188.1-201ENST00000436709 154 ntBASIC1.73□□□□□ -2.13
BDNFP23560 RPL30P7-201ENST00000479312 323 ntBASIC1.73□□□□□ -2.13
BDNFP23560 AC103851.1-201ENST00000506833 274 ntBASIC1.73□□□□□ -2.13
BDNFP23560 RNU6-864P-201ENST00000516256 108 ntBASIC1.73□□□□□ -2.13
BDNFP23560 AC019176.1-201ENST00000518519 225 ntBASIC1.73□□□□□ -2.13
BDNFP23560 AC005668.1-201ENST00000571142 476 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms