Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 OR4G1P-203ENST00000641984 1631 ntBASIC0.77□□□□□ -2.29
UPK1BO75841 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
UPK1BO75841 SNORD50.1-201ENST00000362987 71 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 RNU6-727P-201ENST00000363592 107 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 RNU6-457P-201ENST00000363999 107 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK1BO75841 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK1BO75841 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK1BO75841 RNU7-187P-201ENST00000458985 68 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 RNU6-261P-201ENST00000459506 102 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 SNORD124-201ENST00000459577 104 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 AC105758.1-201ENST00000506038 399 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 RNU6-947P-201ENST00000516264 106 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UPK1BO75841 AK6P2-201ENST00000549020 471 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 AC121247.2-201ENST00000604776 136 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 FAM157A-202ENST00000615155 405 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 U6.73-201ENST00000619194 103 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 AC012676.2-201ENST00000619258 186 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 AC073534.2-201ENST00000620377 381 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.76□□□□□ -2.29
UPK1BO75841 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UPK1BO75841 RNU4-79P-201ENST00000362764 141 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 SNORA7.1-201ENST00000363750 139 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RNU4-76P-201ENST00000364509 141 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 Y_RNA.359-201ENST00000365498 102 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AL034345.1-201ENST00000407768 123 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 MIR1261-201ENST00000408659 82 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 SNRPEP10-201ENST00000420249 274 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK1BO75841 Z82205.1-201ENST00000428456 297 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RN7SL429P-201ENST00000479090 223 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RN7SL489P-201ENST00000486185 223 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC083904.1-201ENST00000487828 231 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RN7SL327P-201ENST00000488659 223 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 SNORA25.14-201ENST00000516481 132 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 SCARNA16.2-201ENST00000516520 172 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.75□□□□□ -2.29
UPK1BO75841 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.75□□□□□ -2.29
UPK1BO75841 AC104383.1-201ENST00000530297 370 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.75□□□□□ -2.29
UPK1BO75841 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK1BO75841 AL137100.2-201ENST00000555786 315 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.75□□□□□ -2.29
UPK1BO75841 AC080078.2-201ENST00000603766 501 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AL133215.3-201ENST00000609801 448 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 RN7SL853P-201ENST00000617250 223 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 AC073349.3-201ENST00000617616 186 ntBASIC0.75□□□□□ -2.29
UPK1BO75841 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK1BO75841 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
UPK1BO75841 SNORD113-7-201ENST00000363762 77 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 EIF4E2P1-201ENST00000393781 255 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.74□□□□□ -2.29
UPK1BO75841 AL355796.1-201ENST00000406706 323 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 MIR1185-2-201ENST00000408687 86 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AL121890.1-201ENST00000435457 205 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC002429.1-201ENST00000437672 148 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 MTCO1P19-201ENST00000443487 500 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 STAG3L5P-204ENST00000443759 179 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC009474.2-201ENST00000451383 136 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC079354.2-201ENST00000453523 154 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC083798.1-201ENST00000472671 131 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 SNORA31.4-201ENST00000516049 129 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 RNA5SP54-201ENST00000516951 92 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 RNU6-58P-201ENST00000517143 103 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC027419.1-201ENST00000522976 328 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.74□□□□□ -2.29
UPK1BO75841 AC026371.1-201ENST00000551867 419 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC100830.2-201ENST00000581636 240 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AL513534.2-201ENST00000603836 250 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AP001330.5-201ENST00000607176 411 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AC017083.3-201ENST00000609955 700 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AL513423.1-201ENST00000621695 132 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AL391516.1-201ENST00000554380 2449 ntBASIC0.74□□□□□ -2.29
UPK1BO75841 AP000568.1-201ENST00000282964 442 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 Y_RNA.151-201ENST00000363566 112 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 RNU6-873P-201ENST00000363833 107 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 Y_RNA.363-201ENST00000365529 113 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 Y_RNA.415-201ENST00000384012 112 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 RNU6-245P-201ENST00000384020 107 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 RNU6-790P-201ENST00000384479 105 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 MIR660-201ENST00000385235 97 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 MIR23A-201ENST00000385245 73 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 SNORD41-201ENST00000386967 70 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC114482.1-201ENST00000418010 247 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 BTF3P4-201ENST00000418852 495 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC063976.4-201ENST00000421971 163 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC092447.3-201ENST00000426027 686 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AL591806.2-201ENST00000433122 173 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AL353572.1-201ENST00000442490 417 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 TPT1P7-201ENST00000458300 517 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC091133.4-201ENST00000511142 308 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 RNU7-99P-201ENST00000516271 62 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.73□□□□□ -2.29
UPK1BO75841 AC004584.2-201ENST00000570407 410 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms