Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Pinc.1-201ENST00000616452 154 ntBASIC0.71□□□□□ -2.3
SHOX2O60902 AC006001.4-201ENST00000622243 395 ntBASIC0.71□□□□□ -2.3
SHOX2O60902 MIR6759-201ENST00000638110 65 ntBASIC0.71□□□□□ -2.3
SHOX2O60902 MTND4P5-201ENST00000435821 1374 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SHOX2O60902 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SHOX2O60902 RNU6-227P-201ENST00000362865 103 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 Y_RNA.287-201ENST00000364853 94 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 MIR329-2-201ENST00000385029 84 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 RNU6-910P-201ENST00000390844 107 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 RNU6-1054P-201ENST00000411293 104 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 RNU6-195P-201ENST00000411352 109 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC008134.1-201ENST00000420943 193 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.7□□□□□ -2.3
SHOX2O60902 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.7□□□□□ -2.3
SHOX2O60902 snoU13.6-201ENST00000458785 104 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 TRBVB-201ENST00000477100 408 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC010493.1-201ENST00000513479 292 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC105417.1-201ENST00000514691 285 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 RNU1-142P-201ENST00000516682 145 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AL137161.1-201ENST00000532231 390 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 TPRKBP2-201ENST00000565969 475 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC008088.1-201ENST00000580993 280 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 AC005014.3-201ENST00000605985 190 ntBASIC0.7□□□□□ -2.3
SHOX2O60902 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 MIR320B2-201ENST00000408479 138 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.69□□□□□ -2.3
SHOX2O60902 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.69□□□□□ -2.3
SHOX2O60902 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.69□□□□□ -2.3
SHOX2O60902 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.69□□□□□ -2.3
SHOX2O60902 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 RNA5SP67-201ENST00000516422 131 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 RNU6-612P-201ENST00000516909 102 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.69□□□□□ -2.3
SHOX2O60902 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
SHOX2O60902 MIR5589-201ENST00000579442 60 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AC090616.2-202ENST00000584248 222 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 BNIP3P39-201ENST00000601077 554 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AP000907.4-201ENST00000604143 237 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AL359075.3-201ENST00000613288 217 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AL513423.1-201ENST00000621695 132 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SHOX2O60902 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 RNY3-201ENST00000365484 102 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 RNU6-456P-201ENST00000384493 107 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 SNORA40.3-201ENST00000390964 122 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 RNA5SP467-201ENST00000391274 118 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.68□□□□□ -2.3
SHOX2O60902 RNU7-138P-201ENST00000459479 64 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 RNU6-1037P-201ENST00000459571 107 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 DEFB108E-201ENST00000524692 240 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 AP002963.1-201ENST00000530590 184 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.68□□□□□ -2.3
SHOX2O60902 SNRPGP20-201ENST00000604477 205 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 GHRLOS.1-201ENST00000610995 70 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.68□□□□□ -2.3
SHOX2O60902 AC009161.2-201ENST00000624626 138 ntBASIC0.68□□□□□ -2.3
SHOX2O60902 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SHOX2O60902 RNU5B-2P-201ENST00000363036 113 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNU6-1305P-201ENST00000364353 104 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNA5SP494-201ENST00000410653 129 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNU6-57P-201ENST00000411348 103 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.67□□□□□ -2.3
SHOX2O60902 AC133104.1-201ENST00000429100 218 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.67□□□□□ -2.3
SHOX2O60902 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.67□□□□□ -2.3
SHOX2O60902 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.67□□□□□ -2.3
SHOX2O60902 MTND2P39-201ENST00000457230 764 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNU7-57P-201ENST00000459540 60 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 MTND1P22-201ENST00000510572 951 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 RNA5SP168-201ENST00000516642 112 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 MTND2P32-201ENST00000521584 1038 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AC025423.5-201ENST00000550230 219 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AL162424.1-201ENST00000602325 221 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AL390123.1-201ENST00000603216 237 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.67□□□□□ -2.3
SHOX2O60902 AC068792.1-201ENST00000621354 417 ntBASIC0.67□□□□□ -2.3
SHOX2O60902 MIR409-201ENST00000362237 79 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 RNU6-505P-201ENST00000384427 107 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AL034345.1-201ENST00000407768 123 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.66□□□□□ -2.3
SHOX2O60902 AC010154.1-201ENST00000425857 269 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AC245047.7-201ENST00000440265 293 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AC007215.1-201ENST00000464893 276 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AC105758.1-201ENST00000506038 399 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 SNORA31.10-201ENST00000516482 106 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 496 ms