Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 AC016717.1-201ENST00000448918 286 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 ATP5J2P3-201ENST00000451550 258 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 AC022493.2-201ENST00000506122 481 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 FGF7P4-201ENST00000509595 295 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC11O43248 AC093023.1-201ENST00000547375 507 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 AL355375.2-201ENST00000574825 175 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC11O43248 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 MTND4LP32-201ENST00000636111 270 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
HOXC11O43248 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
HOXC11O43248 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC11O43248 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC11O43248 RNU6-890P-201ENST00000384121 107 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR625-201ENST00000385047 85 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC11O43248 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC11O43248 RPL23AP3-201ENST00000453844 468 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 snoU13.23-201ENST00000458863 104 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR2053-201ENST00000459295 91 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 AC091179.3-201ENST00000474761 144 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MRPS17P9-201ENST00000511924 393 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 RNU6-237P-201ENST00000515985 71 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 Y_RNA.683-201ENST00000516508 93 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 RNU6-856P-201ENST00000516959 98 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 AC091144.1-201ENST00000519573 138 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR4524B-201ENST00000581569 115 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR1244-1-201ENST00000612829 85 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 Y_RNA.804-201ENST00000615262 101 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC11O43248 MIR1244-3-201ENST00000635744 85 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR1244-2-201ENST00000636449 85 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 MIR1244-4-202ENST00000636813 85 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.19□□□□□ -2.06
HOXC11O43248 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC11O43248 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC11O43248 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC11O43248 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXC11O43248 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HOXC11O43248 RNU6-281P-201ENST00000384212 103 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 SNORA67.2-201ENST00000384300 149 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 Y_RNA.529-201ENST00000384586 119 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 Y_RNA.577-201ENST00000384794 101 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 SNORA48.1-201ENST00000390879 135 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 RNU6-57P-201ENST00000411348 103 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC11O43248 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC11O43248 MTATP6P23-201ENST00000440153 476 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC11O43248 RNU6-470P-201ENST00000515954 104 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC11O43248 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC11O43248 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC11O43248 AL008636.1-201ENST00000625038 1018 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 snoZ196.1-201ENST00000625269 89 ntBASIC2.18□□□□□ -2.06
HOXC11O43248 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HOXC11O43248 MTND5P35-201ENST00000557537 1720 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 U3.8-201ENST00000363675 217 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 RNU6-879P-201ENST00000364328 108 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 Y_RNA.358-201ENST00000365491 99 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 Y_RNA.415-201ENST00000384012 112 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 MT-TD-201ENST00000387419 68 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 RNY4P36-201ENST00000391116 96 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 AL445646.1-201ENST00000431784 216 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 AC236972.2-201ENST00000434979 310 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 MTCO3P10-201ENST00000455912 772 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXC11O43248 RNU6-1041P-201ENST00000516254 102 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 CYCSP23-201ENST00000519781 313 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 SUB1P3-201ENST00000564581 315 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 AL109918.3-201ENST00000603072 338 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 MZT1P2-201ENST00000604387 248 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 AC084781.2-201ENST00000615568 161 ntBASIC2.17□□□□□ -2.06
HOXC11O43248 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXC11O43248 SNORD87-201ENST00000364849 89 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 Y_RNA.557-201ENST00000384680 107 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 MIR676-201ENST00000390702 67 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 MIR1253-201ENST00000408273 105 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 RNU6-1156P-201ENST00000410365 100 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 Y_RNA.595-201ENST00000410403 105 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 AC114482.1-201ENST00000418010 247 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 EIF1P2-201ENST00000428233 350 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 NDUFB4P10-201ENST00000452541 359 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 AC011406.1-201ENST00000512440 370 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 RNU6-1146P-201ENST00000516282 102 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 RNU6-107P-201ENST00000516643 102 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 RNU7-4P-201ENST00000516961 62 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 Y_RNA.718-201ENST00000517110 102 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 AC022868.1-201ENST00000517767 391 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HOXC11O43248 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
HOXC11O43248 AC126177.8-201ENST00000618339 1015 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 309.9 ms