Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR8084-201ENST00000614105 89 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 AC027514.1-201ENST00000588561 1603 ntBASIC-0.69□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORA36.1-201ENST00000363424 132 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORA36A-201ENST00000384221 132 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR499A-201ENST00000384903 122 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 SNAP23P1-201ENST00000433229 246 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 AC008628.2-201ENST00000502605 298 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU4-49P-201ENST00000516080 140 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR4804-201ENST00000581683 73 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 AC024060.1-201ENST00000607052 494 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 AC008250.2-201ENST00000615261 205 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 AL008636.1-201ENST00000625038 1018 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 snoZ196.1-201ENST00000625269 89 ntBASIC-0.7□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR196A2-201ENST00000385189 110 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 RNA5SP300-201ENST00000391197 107 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR1284-201ENST00000408337 120 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC012306.1-201ENST00000423267 114 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-221P-201ENST00000459541 99 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 RPL17P19-201ENST00000489069 552 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC114811.1-201ENST00000507207 168 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU7-129P-201ENST00000516128 62 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 ADI1P3-201ENST00000549509 470 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR1273G-201ENST00000577677 100 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR4645-201ENST00000583158 77 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC144521.1-201ENST00000607148 956 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AL355073.2-201ENST00000612106 557 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC012409.4-201ENST00000612923 249 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 AC016911.1-201ENST00000613297 452 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR548AZ-201ENST00000616567 95 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 FTX_2.1-201ENST00000618816 94 ntBASIC-0.71□□□□□ -2.52
CHKB-CPT1BH3BT56 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR520C-201ENST00000385005 87 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 ZNF885P-201ENST00000420174 1098 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 SNRPGP9-201ENST00000456025 225 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU2-10P-201ENST00000516375 211 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AC109479.2-201ENST00000517842 174 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AC093027.1-201ENST00000546698 429 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AC026470.2-201ENST00000561492 181 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AC009712.1-201ENST00000564938 316 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AL158032.1-201ENST00000605401 106 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 MIR3666-201ENST00000607845 111 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 SNORA43.4-201ENST00000629559 138 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 AC005592.1-201ENST00000566527 1640 ntBASIC-0.72□□□□□ -2.52
CHKB-CPT1BH3BT56 RNU6-207P-201ENST00000384137 107 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR329-2-201ENST00000385029 84 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 RPS29P13-201ENST00000402041 169 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-607P-201ENST00000411283 108 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC005534.2-201ENST00000431047 433 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC004386.2-201ENST00000441858 148 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC069271.1-201ENST00000445577 156 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC009237.7-201ENST00000447357 229 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC007327.1-201ENST00000447461 264 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 HMGN1P10-201ENST00000474557 553 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 SNORA74.3-201ENST00000517108 154 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR5006-201ENST00000583027 110 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC092574.1-201ENST00000609771 420 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 AC010999.1-201ENST00000611856 324 ntBASIC-0.73□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-161P-201ENST00000363051 106 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-236P-201ENST00000363886 106 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-46P-201ENST00000383860 107 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR760-201ENST00000390220 80 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR1185-2-201ENST00000408687 86 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 Z99497.1-201ENST00000421282 135 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 USP9YP11-201ENST00000427537 717 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-123P-201ENST00000516163 102 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-551P-201ENST00000516661 103 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 IGLVI-20-201ENST00000519296 130 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 AC087894.1-201ENST00000538359 518 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 AL592221.1-201ENST00000605266 382 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.74□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-354P-201ENST00000383862 107 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 RNU6-610P-201ENST00000384264 107 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MIR891A-201ENST00000401237 79 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AL049545.1-201ENST00000401856 572 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 MTND3P20-201ENST00000407663 186 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AC004866.1-201ENST00000411748 78 ntBASIC-0.75□□□□□ -2.53
CHKB-CPT1BH3BT56 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms