Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIR5701-3-201ENST00000578890 82 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 MIR4273-201ENST00000582824 84 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 MIR5701-1-201ENST00000585138 82 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AL050343.2-201ENST00000607338 280 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AL357075.2-201ENST00000614906 189 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 MIR5701-2-201ENST00000615634 82 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM49D1C9J1S8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.31-201ENST00000362574 102 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 RNY1P16-201ENST00000363063 111 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.106-201ENST00000363189 100 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 SNORD114-6-201ENST00000364393 72 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-546P-201ENST00000383991 107 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-1297P-201ENST00000384415 104 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 USMG5P1-201ENST00000425964 177 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 PRELID3BP1-201ENST00000457142 540 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AC115990.1-201ENST00000526957 301 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 MIR3923-201ENST00000579521 83 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 MIR3136-201ENST00000583498 78 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AC125232.2-201ENST00000592457 143 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 AL773524.1-201ENST00000614065 229 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 ZNF299P-201ENST00000406845 1804 ntBASIC1.51□□□□□ -2.17
TRIM49D1C9J1S8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 MIR369-201ENST00000362155 70 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.80-201ENST00000362996 102 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-873P-201ENST00000363833 107 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.216-201ENST00000364205 93 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.387-201ENST00000383918 102 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.485-201ENST00000384395 102 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 MIR597-201ENST00000384968 97 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 MIR10B-201ENST00000385011 110 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-482P-201ENST00000391068 107 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-1001P-201ENST00000411265 100 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC244636.1-201ENST00000421152 228 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC092423.1-201ENST00000430165 186 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC004386.2-201ENST00000441858 148 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RPL23AP6-201ENST00000446637 472 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC016717.1-201ENST00000448918 286 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 OR2AQ1P-201ENST00000451972 200 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RNU7-169P-201ENST00000459456 61 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC097473.1-201ENST00000508142 408 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC093303.1-201ENST00000514549 295 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC034114.1-201ENST00000520293 285 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC022616.8-201ENST00000533569 253 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AL353997.5-201ENST00000618886 171 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 AC022513.1-201ENST00000624512 117 ntBASIC1.5□□□□□ -2.17
TRIM49D1C9J1S8 MTND5P16-201ENST00000460269 1703 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-1115P-201ENST00000362490 106 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.61-201ENST00000362835 102 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 U3.9-201ENST00000363823 204 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.319-201ENST00000365138 92 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-596P-201ENST00000365395 98 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-17P-201ENST00000384245 107 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU6-18P-201ENST00000384527 107 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNA5SP213-201ENST00000391031 106 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 SNORA75.6-201ENST00000391318 127 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RPL23AP50-201ENST00000434149 455 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 CYP2C59P-201ENST00000457790 269 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 snoU13.30-201ENST00000458951 104 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 Y_RNA.653-201ENST00000459091 95 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 RNU7-87P-201ENST00000459343 62 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AC093259.1-201ENST00000509755 300 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AL590705.4-201ENST00000532209 134 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 EIF4A1P12-201ENST00000551910 141 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 MIR5695-201ENST00000579717 85 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AL031274.2-201ENST00000599419 203 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AC005520.5-201ENST00000613926 164 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 AL590240.4-201ENST00000616908 390 ntBASIC1.49□□□□□ -2.17
TRIM49D1C9J1S8 PISRT1.1-201ENST00000616930 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms