Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.17□□□□□ -2.06
CHMP4AQ9BY43 MIR8063-201ENST00000621930 81 ntBASIC2.17□□□□□ -2.06
CHMP4AQ9BY43 AC024614.3-201ENST00000637860 256 ntBASIC2.17□□□□□ -2.06
CHMP4AQ9BY43 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.17□□□□□ -2.06
CHMP4AQ9BY43 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHMP4AQ9BY43 Y_RNA.9-201ENST00000362354 101 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 RNU6-271P-201ENST00000363858 105 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 RNU4-9P-201ENST00000364951 139 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 RNA5SP190-201ENST00000365222 118 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 Z82205.1-201ENST00000428456 297 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 PPP1R2P5-201ENST00000457256 603 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 MTND5P10-201ENST00000603719 1809 ntBASIC2.16□□□□□ -2.06
CHMP4AQ9BY43 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CHMP4AQ9BY43 Y_RNA.151-201ENST00000363566 112 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 RNU4-12P-201ENST00000365233 139 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.530-201ENST00000384587 101 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 MIR549A-201ENST00000385268 96 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 RN7SKP51-201ENST00000410781 304 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 AC027119.1-201ENST00000440877 241 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 NDUFB4P10-201ENST00000452541 359 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 MIR4709-201ENST00000577272 72 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 SNORD11B-201ENST00000607707 90 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 AC126177.8-201ENST00000618339 1015 ntBASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.15□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.100-201ENST00000363141 102 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 SNORD1A-201ENST00000364968 72 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 AL161935.2-201ENST00000414627 60 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 ZNF885P-201ENST00000420174 1098 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 EIF1P1-201ENST00000421436 341 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 AL590632.1-201ENST00000424289 371 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 MTCO3P8-201ENST00000453691 755 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 AF186996.7-201ENST00000492781 209 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 EIF1P4-201ENST00000572664 335 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 7SK.7-201ENST00000603504 247 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 PRR13P7-201ENST00000605538 430 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 snoZ196.1-201ENST00000625269 89 ntBASIC2.14□□□□□ -2.07
CHMP4AQ9BY43 RNU6-1305P-201ENST00000364353 104 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 AL358453.1-201ENST00000422522 250 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 MTCO3P18-201ENST00000440206 761 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 PCMTD1P1-201ENST00000455560 355 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 AC099513.1-201ENST00000490423 301 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 RNU6-256P-201ENST00000516747 97 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 TPRKBP2-201ENST00000565969 475 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 MIR4769-201ENST00000584126 77 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 AP001485.1-201ENST00000604799 199 ntBASIC2.13□□□□□ -2.07
CHMP4AQ9BY43 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 RNU6-1123P-201ENST00000362347 106 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 RNY4P14-201ENST00000363656 96 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.516-201ENST00000384541 124 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 RPL23AP75-201ENST00000491601 451 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 AC015688.6-201ENST00000577737 104 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 MIR3937-201ENST00000580135 106 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 AC023043.2-201ENST00000589678 1026 ntBASIC2.12□□□□□ -2.07
CHMP4AQ9BY43 RNU1-17P-201ENST00000363022 152 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 SNORD26-201ENST00000384147 75 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.450-201ENST00000384198 113 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU6-95P-201ENST00000384697 107 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 SNORD116-4-201ENST00000384733 96 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU6-373P-201ENST00000411247 98 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU7-66P-201ENST00000459469 62 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU7-57P-201ENST00000459540 60 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RPL30P7-201ENST00000479312 323 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU6-273P-201ENST00000516937 96 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 AL138726.1-201ENST00000614873 333 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 AC100810.6-201ENST00000638068 285 ntBASIC2.11□□□□□ -2.07
CHMP4AQ9BY43 RNU1-62P-201ENST00000362599 164 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.414-201ENST00000384011 101 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 RNU6-1215P-201ENST00000384441 102 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 MIR153-2-201ENST00000385225 87 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 RNA5SP323-201ENST00000391094 133 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 ACA59.1-201ENST00000515966 143 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 SNORA59B-202ENST00000578183 701 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 MIR3124-201ENST00000582636 67 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 POLR3GP2-201ENST00000588366 668 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 AC090617.10-201ENST00000624308 134 ntBASIC2.1□□□□□ -2.07
CHMP4AQ9BY43 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.89-201ENST00000363031 102 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.295-201ENST00000364918 102 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 Y_RNA.573-201ENST00000384763 105 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 MIR517C-201ENST00000385103 95 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 RNU11-5P-201ENST00000391216 129 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 HMGN2P34-201ENST00000437647 269 ntBASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP4AQ9BY43 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms