Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC105758.1-201ENST00000506038 399 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNU6-976P-201ENST00000516086 111 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 SNORA48.11-201ENST00000517015 89 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR5089-201ENST00000580047 84 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR1244-1-201ENST00000612829 85 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 AC134503.1-201ENST00000633048 54 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR1244-3-201ENST00000635744 85 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR1244-2-201ENST00000636449 85 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 MIR1244-4-202ENST00000636813 85 ntBASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTP3Q9BQQ7 RNU1-23P-201ENST00000363361 144 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 U3.9-201ENST00000363823 204 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 SNORD32B-201ENST00000364460 84 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 U8.10-201ENST00000384260 133 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 MIR487A-201ENST00000385009 80 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 RNU6-308P-201ENST00000390957 107 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 RPS26P42-201ENST00000413485 326 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 MTCYBP10-201ENST00000424905 650 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AL137792.2-201ENST00000443484 235 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 TOMM22P6-201ENST00000465035 409 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 RNA5SP445-201ENST00000515889 115 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AC020661.2-201ENST00000560114 134 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AC004584.2-201ENST00000570407 410 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AC104581.2-201ENST00000572227 430 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 MIR4719-201ENST00000585233 84 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 AL355802.3-201ENST00000607571 545 ntBASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.14□□□□□ -2.07
RTP3Q9BQQ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR190B-201ENST00000401119 79 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR1302-11-201ENST00000408051 138 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR1302-9-201ENST00000408365 138 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR1302-10-201ENST00000408734 138 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 RNU6-321P-201ENST00000410912 106 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 AC007098.1-201ENST00000420122 367 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 AC018865.2-201ENST00000423631 129 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MTCYBP6-201ENST00000441810 138 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 IPO7P1-201ENST00000442031 636 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 AC245517.4-201ENST00000448601 281 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.631-201ENST00000459607 101 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 AC018630.3-201ENST00000542637 96 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR3171-201ENST00000584270 74 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 SNRPGP17-201ENST00000603780 214 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MIR1302-2-201ENST00000607096 138 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 RMST_6.1-201ENST00000611980 203 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 AC137590.2-201ENST00000619709 240 ntBASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTP3Q9BQQ7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 RNU6-874P-201ENST00000362390 105 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 RNY3P11-201ENST00000364153 102 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.216-201ENST00000364205 93 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 RNU6-17P-201ENST00000384245 107 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 RNU6-18P-201ENST00000384527 107 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 MIR548P-201ENST00000408336 84 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 CBX3P6-201ENST00000430257 527 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 AL035666.1-201ENST00000446195 348 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 SNORD116.3-201ENST00000517176 78 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 AC100812.1-201ENST00000607622 580 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
RTP3Q9BQQ7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms