Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 NFU1P2-201ENST00000448700 469 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 MTND1P11-201ENST00000456661 876 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 snoU13.9-201ENST00000458927 103 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 HMGN2P26-201ENST00000463169 339 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 AC026371.1-201ENST00000551867 419 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 HMGB1P33-201ENST00000563485 527 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 MIR4742-201ENST00000581069 85 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 AP003465.2-201ENST00000602571 373 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 SCARNA4-201ENST00000629045 128 ntBASIC1.31□□□□□ -2.2
CCDC65Q8IXS2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNU6-451P-201ENST00000362921 107 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNU6-1235P-201ENST00000384559 107 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNA5SP504-201ENST00000410676 117 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 TOMM22P2-201ENST00000430735 237 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 NDUFA5P4-201ENST00000436704 385 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 SEPT14P3-201ENST00000439401 183 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AL732372.2-207ENST00000445840 183 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 SEPT14P2-201ENST00000453405 183 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNU6-498P-201ENST00000459468 107 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 SEPT14P4-201ENST00000513445 186 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNU6-1281P-201ENST00000516223 105 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RNU6-948P-201ENST00000516374 107 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 FO082796.1-201ENST00000523795 183 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 AC146944.4-201ENST00000602697 718 ntBASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.38-201ENST00000362617 102 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.151-201ENST00000363566 112 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 RNU4-75P-201ENST00000364621 146 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 RNU6-95P-201ENST00000384697 107 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 MIR1267-201ENST00000408723 78 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AL590632.1-201ENST00000424289 371 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 RPS26P55-201ENST00000471178 356 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 RNA5SP458-201ENST00000516188 119 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 MTND1P35-201ENST00000526739 508 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AC016957.1-201ENST00000534895 309 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 MIR4753-201ENST00000585119 83 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AL162413.1-201ENST00000603198 110 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AC103591.3-201ENST00000608684 209 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AL359757.2-201ENST00000624309 274 ntBASIC1.29□□□□□ -2.2
CCDC65Q8IXS2 AL391987.6-201ENST00000305671 199 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.194-201ENST00000363985 102 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 SNORA4.2-201ENST00000365313 147 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 Y_RNA.373-201ENST00000365600 103 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 MIR586-201ENST00000385035 97 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 Z82188.1-201ENST00000436709 154 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 MTND1P1-201ENST00000445453 368 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 Z83846.1-201ENST00000446798 265 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 RNA5SP445-201ENST00000515889 115 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 DISC2.1-201ENST00000612827 205 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 AL138726.1-201ENST00000614873 333 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 AC008873.1-201ENST00000625051 138 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
CCDC65Q8IXS2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 MTND4P5-201ENST00000435821 1374 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 RNU6-1252P-201ENST00000363054 104 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 RNY3P3-201ENST00000363816 102 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 RNU6-128P-201ENST00000383976 107 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 MTCO3P29-201ENST00000432119 779 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 MTCO3P18-201ENST00000440206 761 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AC073910.1-201ENST00000445047 438 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AC024909.2-201ENST00000553035 286 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 ZNF519P2-201ENST00000557032 169 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AF250324.2-201ENST00000608299 610 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 AC048344.4-201ENST00000619744 527 ntBASIC1.27□□□□□ -2.21
CCDC65Q8IXS2 MIR1321-201ENST00000637766 79 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms