Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 AL356094.1-201ENST00000624663 1212 ntBASIC-0.31□□□□□ -2.46
CSPG4Q6UVK1 RNU6-562P-201ENST00000362731 107 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RNU4-76P-201ENST00000364509 141 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 SNORA27.3-201ENST00000364937 134 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 MIR544A-201ENST00000384855 91 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AL353997.1-201ENST00000432936 108 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 HMGN2P26-201ENST00000463169 339 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC027288.2-201ENST00000553028 243 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC122134.1-202ENST00000569111 1201 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC100814.1-201ENST00000606963 623 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC092656.1-203ENST00000624134 423 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AL450472.1-202ENST00000637286 180 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 MIRLET7C-201ENST00000362160 84 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RNY4P7-201ENST00000364600 96 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RNU6-843P-201ENST00000384454 104 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RNU6-331P-201ENST00000384724 107 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 MIR106A-201ENST00000384870 81 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RNU2-3P-201ENST00000410144 191 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AL392103.1-201ENST00000447000 198 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 MTND2P6-201ENST00000455337 1030 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC112206.4-201ENST00000515142 405 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 RPL23AP91-201ENST00000569211 455 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC023827.1-201ENST00000569247 97 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 AC018462.2-201ENST00000605375 395 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 U6.108-201ENST00000637764 58 ntBASIC-0.32□□□□□ -2.46
CSPG4Q6UVK1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6-278P-201ENST00000390945 109 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AL365338.1-201ENST00000422282 858 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AL590623.1-201ENST00000427864 105 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AC107401.1-201ENST00000503426 685 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 SNORA18.7-201ENST00000516910 131 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6-856P-201ENST00000516959 98 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 MIR15A-201ENST00000607334 83 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AL355073.2-201ENST00000612106 557 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AC083799.1-201ENST00000366451 910 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 ELOCP21-201ENST00000412558 336 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 MTATP6P16-201ENST00000434543 526 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AC007969.2-201ENST00000441891 191 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AC104629.1-201ENST00000494226 508 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6-123P-201ENST00000516163 102 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AL158042.1-201ENST00000605338 460 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AC015726.2-201ENST00000620112 122 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 AL391099.1-201ENST00000624635 187 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 SNORD98-201ENST00000636377 67 ntBASIC-0.33□□□□□ -2.46
CSPG4Q6UVK1 RNU6-364P-201ENST00000384387 107 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNU6-613P-201ENST00000410412 108 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNU2-59P-201ENST00000410482 191 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNU6-994P-201ENST00000410507 111 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNU7-94P-201ENST00000459576 63 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNA5SP461-201ENST00000516451 104 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 RNU6-448P-201ENST00000517052 107 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 MIR4789-201ENST00000577469 82 ntBASIC-0.34□□□□□ -2.46
CSPG4Q6UVK1 SNORD56.4-201ENST00000363883 71 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 RNU6-679P-201ENST00000391003 106 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 RNU6-796P-201ENST00000391086 107 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 AC119751.4-201ENST00000507498 357 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 RNA5SP94-201ENST00000516917 108 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 DPPA3P3-201ENST00000603842 430 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 AL034555.1-201ENST00000604816 211 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 MIR3666-201ENST00000607845 111 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 AC005520.5-201ENST00000613926 164 ntBASIC-0.35□□□□□ -2.46
CSPG4Q6UVK1 RNY4P27-201ENST00000363341 96 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RNU6-417P-201ENST00000384712 107 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 MIR549A-201ENST00000385268 96 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 SNORD65.1-201ENST00000390889 71 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 MRPL42P3-201ENST00000401492 326 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 RNU4-46P-201ENST00000410818 138 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 ZNF885P-201ENST00000420174 1098 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 MTCO3P43-201ENST00000440974 771 ntBASIC-0.35□□□□□ -2.47
CSPG4Q6UVK1 AC007215.1-201ENST00000464893 276 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms