Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC007395.1-201ENST00000451333 677 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AC016925.1-201ENST00000458303 298 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 RNU1-131P-201ENST00000458943 161 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 RNU6-329P-201ENST00000459618 107 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AC005840.1-201ENST00000498412 377 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 RNVU1-2-201ENST00000516326 135 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 Y_RNA.682-201ENST00000516457 100 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AL161670.1-201ENST00000554348 137 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.73□□□□□ -2.13
GABPAQ06546 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.73□□□□□ -2.13
GABPAQ06546 MIR4790-201ENST00000577799 79 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 AC010928.2-201ENST00000588017 287 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 U6atac.1-201ENST00000616025 117 ntBASIC1.73□□□□□ -2.13
GABPAQ06546 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.73□□□□□ -2.13
GABPAQ06546 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.73□□□□□ -2.13
GABPAQ06546 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.72□□□□□ -2.13
GABPAQ06546 ZNF204P-201ENST00000416749 2397 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
GABPAQ06546 MIR340-201ENST00000362125 95 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 RNU6-418P-201ENST00000384035 107 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 SNORA8-201ENST00000384574 139 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 MIR300-201ENST00000401138 83 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 MIR320B2-201ENST00000408479 138 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 Y_RNA.599-201ENST00000410489 109 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.72□□□□□ -2.13
GABPAQ06546 AL139396.1-201ENST00000421137 167 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
GABPAQ06546 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.72□□□□□ -2.13
GABPAQ06546 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.72□□□□□ -2.13
GABPAQ06546 AC007215.1-201ENST00000464893 276 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 AC018710.1-201ENST00000506509 158 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.72□□□□□ -2.13
GABPAQ06546 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.72□□□□□ -2.13
GABPAQ06546 Y_RNA.676-201ENST00000516393 96 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.72□□□□□ -2.13
GABPAQ06546 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 MIR4753-201ENST00000585119 83 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 AC092794.1-201ENST00000612734 582 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 SCARNA4-201ENST00000629045 128 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 ZNF209P-201ENST00000593450 2304 ntBASIC1.72□□□□□ -2.13
GABPAQ06546 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
GABPAQ06546 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
GABPAQ06546 AL159152.1-201ENST00000635019 2587 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
GABPAQ06546 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
GABPAQ06546 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 MIR1283-1-201ENST00000408494 87 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 MTCO1P44-201ENST00000441935 243 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.71□□□□□ -2.14
GABPAQ06546 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.71□□□□□ -2.14
GABPAQ06546 RNU6-358P-201ENST00000516564 75 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 RRN3P3-201ENST00000549207 578 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 SNORA59B-202ENST00000578183 701 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 AC005786.1-201ENST00000588553 154 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 AC011712.1-201ENST00000588959 234 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 7SK.7-201ENST00000603504 247 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 AC083806.3-201ENST00000614016 455 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.71□□□□□ -2.14
GABPAQ06546 AL133216.2-202ENST00000634512 349 ntBASIC1.71□□□□□ -2.14
GABPAQ06546 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.7□□□□□ -2.14
GABPAQ06546 CBX3P1-201ENST00000325243 554 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 RNU6-1059P-201ENST00000363752 98 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 AC004965.1-201ENST00000413033 213 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 RPL30P16-201ENST00000419341 429 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 USP9YP30-201ENST00000430729 455 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
GABPAQ06546 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 snoU13.30-201ENST00000458951 104 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 AC010531.2-201ENST00000465012 153 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.7□□□□□ -2.14
GABPAQ06546 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 AC097473.1-201ENST00000508142 408 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.7□□□□□ -2.14
GABPAQ06546 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.7□□□□□ -2.14
GABPAQ06546 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
GABPAQ06546 MTND4P5-201ENST00000435821 1374 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 BX322639.1-202ENST00000423987 2213 ntBASIC1.7□□□□□ -2.14
GABPAQ06546 U8.1-201ENST00000362843 134 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 RNU6-1305P-201ENST00000364353 104 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 Y_RNA.533-201ENST00000384596 114 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 RNU6-541P-201ENST00000384709 110 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AL356776.1-201ENST00000406574 447 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AC004866.1-201ENST00000411748 78 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 MTND3P8-201ENST00000412909 339 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AC009237.7-201ENST00000447357 229 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 MTND1P17-201ENST00000448961 204 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AC009474.2-201ENST00000451383 136 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 AL163540.1-201ENST00000485382 386 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 RNA5SP54-201ENST00000516951 92 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
GABPAQ06546 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.69□□□□□ -2.14
GABPAQ06546 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.69□□□□□ -2.14
GABPAQ06546 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.69□□□□□ -2.14
GABPAQ06546 MIR4742-201ENST00000581069 85 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms