Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR300-201ENST00000401138 83 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 MIR548H2-201ENST00000408874 88 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-735P-201ENST00000410612 107 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AL365338.1-201ENST00000422282 858 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.22□□□□□ -2.44
HSPG2P98160 AL133396.1-201ENST00000432048 687 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC074290.1-201ENST00000448883 135 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RPS29P15-201ENST00000458329 171 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 SUMO2P5-201ENST00000506790 245 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC114811.1-201ENST00000507207 168 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-885P-201ENST00000516607 104 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC023050.3-201ENST00000541142 333 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 TMF1P1-201ENST00000576058 373 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC011195.1-201ENST00000578177 177 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AC092447.9-201ENST00000603395 144 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 MTND3P19-201ENST00000603825 345 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RN7SL660P-201ENST00000614852 299 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AP000676.3-201ENST00000623299 569 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-166P-201ENST00000384371 107 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 MIR760-201ENST00000390220 80 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 SNORA12.2-201ENST00000391040 156 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 SNORA26.3-201ENST00000391119 136 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 MTCO3P1-205ENST00000422088 832 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.22□□□□□ -2.44
HSPG2P98160 MRPS10P2-201ENST00000431226 381 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU1-142P-201ENST00000516682 145 ntBASIC-0.22□□□□□ -2.44
HSPG2P98160 RNU6-819P-201ENST00000364116 107 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 MIR7-1-201ENST00000384871 110 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 RNU6-679P-201ENST00000391003 106 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.22□□□□□ -2.45
HSPG2P98160 AC106883.1-201ENST00000418805 562 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AL139421.1-201ENST00000423010 169 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AC109445.1-201ENST00000512356 383 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.22□□□□□ -2.45
HSPG2P98160 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.22□□□□□ -2.45
HSPG2P98160 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.22□□□□□ -2.45
HSPG2P98160 RPL23AP91-201ENST00000569211 455 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 MIR4666A-201ENST00000580160 79 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AC100830.2-201ENST00000581636 240 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AC138749.5-201ENST00000611461 208 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 AP000484.1-201ENST00000620067 1252 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 MIR8054-201ENST00000620877 86 ntBASIC-0.22□□□□□ -2.45
HSPG2P98160 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MIR520G-201ENST00000385064 90 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MIR520H-201ENST00000385126 88 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-370P-201ENST00000411008 104 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.23□□□□□ -2.45
HSPG2P98160 C1DP2-201ENST00000418167 426 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 COX7BP2-201ENST00000437976 242 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 C1DP4-201ENST00000455429 424 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AC093809.1-201ENST00000509155 340 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MIR2115-201ENST00000516657 100 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-914P-201ENST00000516749 109 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AL929325.1-201ENST00000603096 117 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC012507.3-201ENST00000603556 477 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AL357080.1-201ENST00000617394 239 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNY3P14-201ENST00000384309 102 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-278P-201ENST00000390945 109 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-57P-201ENST00000411348 103 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.23□□□□□ -2.45
HSPG2P98160 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AC093019.1-201ENST00000443135 252 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 HSFY5P-201ENST00000453726 309 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AC007215.1-201ENST00000464893 276 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC104563.1-201ENST00000476147 376 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MTCO1P31-201ENST00000506355 492 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.23□□□□□ -2.45
HSPG2P98160 SNORA31.3-201ENST00000516029 96 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.23□□□□□ -2.45
HSPG2P98160 AC099654.9-201ENST00000637055 678 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MTND4P4-201ENST00000439033 1366 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MIR340-201ENST00000362125 95 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-424P-201ENST00000384367 105 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 SNORD116-20-201ENST00000384529 92 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNY1P7-201ENST00000384743 110 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MRPL42P4-201ENST00000453267 443 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC007547.1-201ENST00000462177 490 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AP000870.1-201ENST00000472927 406 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC010468.3-201ENST00000508225 458 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 RNA5SP461-201ENST00000516451 104 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AP002004.2-201ENST00000531656 154 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.23□□□□□ -2.45
HSPG2P98160 ZNF971P-201ENST00000562068 1249 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 MIR4432-201ENST00000581823 84 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AL390123.1-201ENST00000603216 237 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 AC006157.1-201ENST00000611750 366 ntBASIC-0.23□□□□□ -2.45
HSPG2P98160 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU6-549P-201ENST00000384433 107 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 DPRXP1-201ENST00000426312 460 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC009237.7-201ENST00000447357 229 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RPL39P36-201ENST00000490784 156 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MTND1P36-201ENST00000522384 936 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms