Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR148B-201ENST00000362252 99 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 SNORA51.4-201ENST00000364993 124 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 RNY4P28-201ENST00000365281 93 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 SNORA46-201ENST00000384762 135 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 RNVU1-14-201ENST00000384770 164 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 RNA5SP120-201ENST00000410900 112 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.75□□□□□ -1.97
CLRN1P58418 NDUFB4P10-201ENST00000452541 359 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 Y_RNA.644-201ENST00000459006 113 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 RNU7-14P-201ENST00000459331 62 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 Y_RNA.674-201ENST00000516362 113 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.75□□□□□ -1.97
CLRN1P58418 AC069294.1-201ENST00000608397 350 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 AC080128.1-201ENST00000474389 1917 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.75□□□□□ -1.97
CLRN1P58418 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
CLRN1P58418 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLRN1P58418 SNORD115-30-201ENST00000364117 82 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 Y_RNA.217-201ENST00000364214 105 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 RNU6-234P-201ENST00000365229 104 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 SNORA7.4-201ENST00000384249 137 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 SNORD67-201ENST00000390833 111 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
CLRN1P58418 Y_RNA.638-201ENST00000459374 113 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 Y_RNA.641-201ENST00000459414 105 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 HMGN2P9-201ENST00000476875 229 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 AC024405.2-202ENST00000532731 184 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.74□□□□□ -1.97
CLRN1P58418 UBL5P2-201ENST00000583788 219 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.74□□□□□ -1.97
CLRN1P58418 AC011921.3-201ENST00000605540 361 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 MIR7112-201ENST00000616126 65 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CLRN1P58418 AC103988.1-201ENST00000566382 2177 ntBASIC2.74□□□□□ -1.97
CLRN1P58418 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CLRN1P58418 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CLRN1P58418 SNORA38.1-201ENST00000364172 131 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 MIR34B-201ENST00000385076 84 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLRN1P58418 Y_RNA.793-201ENST00000411222 111 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 SNORD2.1-201ENST00000458762 69 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 COX6CP14-201ENST00000469580 174 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 RN7SL807P-201ENST00000470923 297 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CLRN1P58418 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.73□□□□□ -1.97
CLRN1P58418 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLRN1P58418 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.72□□□□□ -1.97
CLRN1P58418 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
CLRN1P58418 SNORA63.1-201ENST00000362493 131 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 Y_RNA.243-201ENST00000364481 109 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 AL031003.1-201ENST00000404229 172 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 SNORA11.1-201ENST00000408133 129 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 MIR1283-1-201ENST00000408494 87 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.72□□□□□ -1.97
CLRN1P58418 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 ATP5EP1-201ENST00000510257 156 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 RNU6-965P-201ENST00000516721 96 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 RN7SKP282-201ENST00000516824 299 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 CBX3P4-201ENST00000538909 354 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.72□□□□□ -1.97
CLRN1P58418 FTX_2.1-201ENST00000618816 94 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 snoU18.1-201ENST00000629629 71 ntBASIC2.72□□□□□ -1.97
CLRN1P58418 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
CLRN1P58418 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLRN1P58418 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.72□□□□□ -1.97
CLRN1P58418 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLRN1P58418 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CLRN1P58418 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CLRN1P58418 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLRN1P58418 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLRN1P58418 MIR22-201ENST00000362190 85 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 Y_RNA.150-201ENST00000363562 102 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 RNU4-70P-201ENST00000384579 139 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 RNU6-1248P-201ENST00000391096 64 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 RPL21P3-201ENST00000395517 478 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 MIR300-201ENST00000401138 83 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 MIR1185-2-201ENST00000408687 86 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
CLRN1P58418 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
CLRN1P58418 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.71□□□□□ -1.98
CLRN1P58418 RN7SL20P-201ENST00000488827 297 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 AC023141.11-201ENST00000508864 202 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLRN1P58418 AC018630.3-201ENST00000542637 96 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.71□□□□□ -1.98
CLRN1P58418 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.71□□□□□ -1.98
CLRN1P58418 AC073349.3-201ENST00000617616 186 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 MIR5739-201ENST00000619803 80 ntBASIC2.71□□□□□ -1.98
CLRN1P58418 U6.115-201ENST00000636045 103 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms