Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORA31.3-201ENST00000516029 96 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 AC093023.1-201ENST00000547375 507 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 AL606834.3-201ENST00000602615 496 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 Z99289.3-201ENST00000605586 594 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 AC100814.1-201ENST00000606963 623 ntBASIC-0.35□□□□□ -2.46
SPTA1P02549 MIR412-201ENST00000362142 91 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 RNU4-15P-201ENST00000362613 141 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 RNU6-161P-201ENST00000363051 106 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 SNORD116-23-201ENST00000384645 92 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 MIR892B-201ENST00000401279 77 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.35□□□□□ -2.47
SPTA1P02549 AC109327.2-201ENST00000448339 378 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 RNU7-136P-201ENST00000458819 69 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPTA1P02549 AC104629.1-201ENST00000494226 508 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 RNU6-123P-201ENST00000516163 102 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 AP001328.1-201ENST00000528550 176 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.35□□□□□ -2.47
SPTA1P02549 AC023827.1-201ENST00000569247 97 ntBASIC-0.35□□□□□ -2.47
SPTA1P02549 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.35□□□□□ -2.47
SPTA1P02549 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR549A-201ENST00000385268 96 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MTCYBP2-201ENST00000407745 171 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC021146.9-201ENST00000512503 156 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AP003716.2-201ENST00000528260 108 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.36□□□□□ -2.47
SPTA1P02549 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.36□□□□□ -2.47
SPTA1P02549 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR548AO-201ENST00000579992 96 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR4666A-201ENST00000580160 79 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR4324-201ENST00000584846 72 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR6738-201ENST00000619620 64 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 CDR1-202ENST00000625883 1485 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU4-76P-201ENST00000364509 141 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU6-343P-201ENST00000364709 104 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU6-364P-201ENST00000384387 107 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 SNORD41-201ENST00000386967 70 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 SNORD65C-201ENST00000390962 71 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU6-932P-201ENST00000391108 106 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 RNU2-3P-201ENST00000410144 191 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AL512326.2-201ENST00000426359 151 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC006026.2-201ENST00000457376 180 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC107401.1-201ENST00000503426 685 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR4432-201ENST00000581823 84 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.36□□□□□ -2.47
SPTA1P02549 FTX_2.1-201ENST00000618816 94 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC015726.2-201ENST00000620112 122 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AL162376.1-201ENST00000624117 175 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 AC092656.1-203ENST00000624134 423 ntBASIC-0.36□□□□□ -2.47
SPTA1P02549 MIR1-1-201ENST00000362147 71 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 SNORA27.3-201ENST00000364937 134 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 MIR10A-201ENST00000385043 110 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 MRPL42P3-201ENST00000401492 326 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 RNU6-914P-201ENST00000516749 109 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 RNU6-158P-201ENST00000517104 100 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.37□□□□□ -2.47
SPTA1P02549 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.37□□□□□ -2.47
SPTA1P02549 RPL21P9-201ENST00000556149 474 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC006600.1-201ENST00000572529 153 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 MIR4743-201ENST00000584576 69 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 MIR4436A-201ENST00000585278 85 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AL390123.1-201ENST00000603216 237 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC018889.1-201ENST00000605372 397 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC122133.1-201ENST00000613964 233 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC104260.1-201ENST00000616660 539 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 RNU1-76P-201ENST00000362903 159 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 RNU2-59P-201ENST00000410482 191 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 ELOCP21-201ENST00000412558 336 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTA1P02549 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.37□□□□□ -2.47
SPTA1P02549 RPL37P6-201ENST00000460682 294 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AL049829.1-201ENST00000465411 156 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AL163973.1-201ENST00000484753 577 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTA1P02549 AK6P2-201ENST00000549020 471 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTA1P02549 AC100830.2-201ENST00000581636 240 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AL034555.1-201ENST00000604816 211 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.37□□□□□ -2.47
SPTA1P02549 AL139418.1-201ENST00000613613 177 ntBASIC-0.37□□□□□ -2.47
SPTA1P02549 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC093899.1-201ENST00000457984 376 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AC119751.4-201ENST00000507498 357 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU1-142P-201ENST00000516682 145 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms