Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RPL37P10-201ENST00000412884 288 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.08□□□□□ -2.24
CHMP2AO43633 ARL5AP1-201ENST00000418991 388 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 MRPS10P2-201ENST00000431226 381 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 DYNLT3P2-201ENST00000442517 295 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC073910.1-201ENST00000445047 438 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC007395.1-201ENST00000451333 677 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RPL31P3-201ENST00000458430 332 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RNU6-1037P-201ENST00000459571 107 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP2AO43633 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP2AO43633 RNU6-835P-201ENST00000516974 104 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AL157687.1-201ENST00000554853 619 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.08□□□□□ -2.24
CHMP2AO43633 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.08□□□□□ -2.24
CHMP2AO43633 AC010620.1-201ENST00000601088 1102 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC136443.5-201ENST00000603741 370 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC064807.4-201ENST00000607201 407 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 AC104458.1-201ENST00000608243 463 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
CHMP2AO43633 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.08□□□□□ -2.24
CHMP2AO43633 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHMP2AO43633 MTND5P26-201ENST00000426018 1752 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.77-201ENST00000362962 107 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.132-201ENST00000363421 102 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.224-201ENST00000364308 111 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MIR194-1-201ENST00000384892 85 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MIR521-1-201ENST00000384902 87 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.582-201ENST00000391023 95 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MIR1283-1-201ENST00000408494 87 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 MTATP6P17-201ENST00000431030 672 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 AL606517.2-201ENST00000442855 241 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 snoU13.27-201ENST00000459278 104 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 SNORA19.2-201ENST00000516013 114 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 Y_RNA.704-201ENST00000516851 102 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 RNU6-856P-201ENST00000516959 98 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.07□□□□□ -2.24
CHMP2AO43633 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP2AO43633 AP001330.5-201ENST00000607176 411 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC005562.2-201ENST00000618264 111 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 AC006001.4-201ENST00000622243 395 ntBASIC1.07□□□□□ -2.24
CHMP2AO43633 BX322639.1-202ENST00000423987 2213 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU6-522P-201ENST00000364497 107 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AL356776.1-201ENST00000406574 447 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU6-648P-201ENST00000410190 107 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU2-66P-201ENST00000410650 161 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 SNX2P2-201ENST00000424553 323 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 Z82188.1-201ENST00000436709 154 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP2AO43633 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP2AO43633 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU7-187P-201ENST00000458985 68 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU6-567P-201ENST00000516746 107 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.06□□□□□ -2.24
CHMP2AO43633 AC087854.1-201ENST00000519706 414 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.06□□□□□ -2.24
CHMP2AO43633 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHMP2AO43633 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP2AO43633 SCOCP1-201ENST00000554676 349 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP2AO43633 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AC146944.4-201ENST00000602697 718 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AP000907.4-201ENST00000604143 237 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AC017083.3-201ENST00000609955 700 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AL158209.2-201ENST00000619266 216 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 MIR338-201ENST00000636369 67 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 AC099654.5-201ENST00000636479 350 ntBASIC1.06□□□□□ -2.24
CHMP2AO43633 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHMP2AO43633 RNU6-562P-201ENST00000362731 107 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNU6-1286P-201ENST00000383871 107 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNU6-968P-201ENST00000384076 107 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNA5SP109-201ENST00000391010 116 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNA5SP467-201ENST00000391274 118 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 AC016909.1-201ENST00000415916 166 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 AL590632.1-201ENST00000424289 371 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 MTCO3P29-201ENST00000432119 779 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 HMGN2P34-201ENST00000437647 269 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 RNU6-1208P-201ENST00000459588 107 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 AC083798.1-201ENST00000472671 131 ntBASIC1.05□□□□□ -2.24
CHMP2AO43633 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms