Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.98□□□□□ -2.09
O00370 AC005562.2-201ENST00000618264 111 ntBASIC1.98□□□□□ -2.09
O00370 AC137590.2-201ENST00000619709 240 ntBASIC1.98□□□□□ -2.09
O00370 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.98□□□□□ -2.09
O00370 Y_RNA.319-201ENST00000365138 92 ntBASIC1.97□□□□□ -2.09
O00370 Y_RNA.474-201ENST00000384341 102 ntBASIC1.97□□□□□ -2.09
O00370 MIR153-2-201ENST00000385225 87 ntBASIC1.97□□□□□ -2.09
O00370 MTCYBP4-201ENST00000401524 249 ntBASIC1.97□□□□□ -2.09
O00370 RNU2-48P-201ENST00000410694 191 ntBASIC1.97□□□□□ -2.09
O00370 AC092423.1-201ENST00000430165 186 ntBASIC1.97□□□□□ -2.09
O00370 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.97□□□□□ -2.09
O00370 AC004386.2-201ENST00000441858 148 ntBASIC1.97□□□□□ -2.09
O00370 SNRPEP8-201ENST00000442866 260 ntBASIC1.97□□□□□ -2.09
O00370 RNU7-175P-201ENST00000515915 61 ntBASIC1.97□□□□□ -2.09
O00370 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
O00370 RNU6-120P-201ENST00000516077 103 ntBASIC1.97□□□□□ -2.09
O00370 Y_RNA.675-201ENST00000516389 149 ntBASIC1.97□□□□□ -2.09
O00370 Y_RNA.706-201ENST00000516933 99 ntBASIC1.97□□□□□ -2.09
O00370 RNU1-117P-201ENST00000517041 158 ntBASIC1.97□□□□□ -2.09
O00370 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
O00370 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
O00370 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
O00370 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
O00370 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
O00370 AC005520.5-201ENST00000613926 164 ntBASIC1.97□□□□□ -2.09
O00370 AL132822.1-201ENST00000617063 513 ntBASIC1.97□□□□□ -2.09
O00370 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
O00370 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
O00370 Y_RNA.58-201ENST00000362807 102 ntBASIC1.96□□□□□ -2.1
O00370 RNY1P16-201ENST00000363063 111 ntBASIC1.96□□□□□ -2.1
O00370 Y_RNA.154-201ENST00000363624 102 ntBASIC1.96□□□□□ -2.1
O00370 RNY3P1-201ENST00000365085 102 ntBASIC1.96□□□□□ -2.1
O00370 RNY3-201ENST00000365484 102 ntBASIC1.96□□□□□ -2.1
O00370 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.96□□□□□ -2.1
O00370 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
O00370 Y_RNA.490-201ENST00000384413 102 ntBASIC1.96□□□□□ -2.1
O00370 RNU6-310P-201ENST00000384655 107 ntBASIC1.96□□□□□ -2.1
O00370 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
O00370 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
O00370 RNU6-700P-201ENST00000391043 107 ntBASIC1.96□□□□□ -2.1
O00370 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
O00370 MIR1262-201ENST00000408276 93 ntBASIC1.96□□□□□ -2.1
O00370 Y_RNA.646-201ENST00000410980 101 ntBASIC1.96□□□□□ -2.1
O00370 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.96□□□□□ -2.1
O00370 MTCO3P8-201ENST00000453691 755 ntBASIC1.96□□□□□ -2.1
O00370 AC132942.1-201ENST00000486753 483 ntBASIC1.96□□□□□ -2.1
O00370 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
O00370 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.96□□□□□ -2.1
O00370 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.96□□□□□ -2.1
O00370 RNU6-277P-201ENST00000516272 106 ntBASIC1.96□□□□□ -2.1
O00370 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
O00370 UBL5P4-201ENST00000562584 236 ntBASIC1.96□□□□□ -2.1
O00370 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
O00370 MIR5696-201ENST00000578474 85 ntBASIC1.96□□□□□ -2.1
O00370 AL355802.3-201ENST00000607571 545 ntBASIC1.96□□□□□ -2.1
O00370 AC005014.2-201ENST00000607795 599 ntBASIC1.96□□□□□ -2.1
O00370 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
O00370 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
O00370 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
O00370 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
O00370 RNU6-1188P-201ENST00000363795 107 ntBASIC1.95□□□□□ -2.1
O00370 RNU6-595P-201ENST00000363944 107 ntBASIC1.95□□□□□ -2.1
O00370 RNA5SP99-201ENST00000364020 114 ntBASIC1.95□□□□□ -2.1
O00370 RNU6-596P-201ENST00000365395 98 ntBASIC1.95□□□□□ -2.1
O00370 Y_RNA.387-201ENST00000383918 102 ntBASIC1.95□□□□□ -2.1
O00370 U8.10-201ENST00000384260 133 ntBASIC1.95□□□□□ -2.1
O00370 SNORD14D-201ENST00000384390 87 ntBASIC1.95□□□□□ -2.1
O00370 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
O00370 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.95□□□□□ -2.1
O00370 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
O00370 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
O00370 HMGN2P18-201ENST00000450680 270 ntBASIC1.95□□□□□ -2.1
O00370 Y_RNA.653-201ENST00000459091 95 ntBASIC1.95□□□□□ -2.1
O00370 HMGB3P17-201ENST00000504195 649 ntBASIC1.95□□□□□ -2.1
O00370 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
O00370 RNU6-307P-201ENST00000516743 106 ntBASIC1.95□□□□□ -2.1
O00370 AC134698.4-201ENST00000523451 826 ntBASIC1.95□□□□□ -2.1
O00370 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.95□□□□□ -2.1
O00370 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.95□□□□□ -2.1
O00370 MIR5695-201ENST00000579717 85 ntBASIC1.95□□□□□ -2.1
O00370 MIR5690-201ENST00000583739 73 ntBASIC1.95□□□□□ -2.1
O00370 MIR1244-1-201ENST00000612829 85 ntBASIC1.95□□□□□ -2.1
O00370 AC025253.1-201ENST00000613623 543 ntBASIC1.95□□□□□ -2.1
O00370 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.95□□□□□ -2.1
O00370 MIR1244-3-201ENST00000635744 85 ntBASIC1.95□□□□□ -2.1
O00370 MIR1244-2-201ENST00000636449 85 ntBASIC1.95□□□□□ -2.1
O00370 MIR1244-4-202ENST00000636813 85 ntBASIC1.95□□□□□ -2.1
O00370 RNU6-545P-201ENST00000362681 104 ntBASIC1.94□□□□□ -2.1
O00370 RNU6-727P-201ENST00000363592 107 ntBASIC1.94□□□□□ -2.1
O00370 Y_RNA.263-201ENST00000364659 114 ntBASIC1.94□□□□□ -2.1
O00370 RNU5E-4P-201ENST00000364931 120 ntBASIC1.94□□□□□ -2.1
O00370 RNU6-890P-201ENST00000384121 107 ntBASIC1.94□□□□□ -2.1
O00370 SNORA12.2-201ENST00000391040 156 ntBASIC1.94□□□□□ -2.1
O00370 MIR320B2-201ENST00000408479 138 ntBASIC1.94□□□□□ -2.1
O00370 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
O00370 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.94□□□□□ -2.1
O00370 AL035666.1-201ENST00000446195 348 ntBASIC1.94□□□□□ -2.1
O00370 MTCO3P10-201ENST00000455912 772 ntBASIC1.94□□□□□ -2.1
O00370 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.94□□□□□ -2.1
O00370 RN7SKP210-201ENST00000459176 261 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms