Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNA5SP437-201ENST00000517249 129 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AP000889.1-201ENST00000530968 660 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 CBX3P4-201ENST00000538909 354 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 MIR5696-201ENST00000578474 85 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.56□□□□□ -2.16
SLC28A1O00337 MIR4273-201ENST00000582824 84 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AC016925.2-201ENST00000605108 242 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AC006001.4-201ENST00000622243 395 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC28A1O00337 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SLC28A1O00337 snoU2-30.2-201ENST00000362805 70 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 RNU6-137P-201ENST00000363680 108 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 SNORA67.2-201ENST00000384300 149 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 MIR1277-201ENST00000408536 78 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AL139396.1-201ENST00000421137 167 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.55□□□□□ -2.16
SLC28A1O00337 RPL30P10-201ENST00000488148 337 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.55□□□□□ -2.16
SLC28A1O00337 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.55□□□□□ -2.16
SLC28A1O00337 SNORA25.14-201ENST00000516481 132 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 RNA5SP481-201ENST00000516814 122 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AC027288.2-201ENST00000553028 243 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 uc_338.5-201ENST00000611839 155 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.55□□□□□ -2.16
SLC28A1O00337 AC073869.6-201ENST00000640656 341 ntBASIC1.55□□□□□ -2.16
SLC28A1O00337 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 SNORA63D-201ENST00000364359 132 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 SNORA72.2-201ENST00000365028 127 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 RNU6-596P-201ENST00000365395 98 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 RNU6-338P-201ENST00000383888 105 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 MIR1253-201ENST00000408273 105 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 AC243428.1-201ENST00000421099 264 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 MTND1P17-201ENST00000448961 204 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.54□□□□□ -2.16
SLC28A1O00337 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.54□□□□□ -2.16
SLC28A1O00337 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 MIR6128-201ENST00000615528 109 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 snoZ196.1-201ENST00000625269 89 ntBASIC1.54□□□□□ -2.16
SLC28A1O00337 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU5F-3P-201ENST00000363767 117 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU6-17P-201ENST00000384245 107 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU6-18P-201ENST00000384527 107 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 Y_RNA.533-201ENST00000384596 114 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 MIR515-2-201ENST00000384883 83 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 MIR515-1-201ENST00000384884 83 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU6-360P-201ENST00000390944 104 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RPL30P16-201ENST00000419341 429 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 HMGN2P34-201ENST00000437647 269 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
SLC28A1O00337 AC011352.1-201ENST00000512300 793 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU7-175P-201ENST00000515915 61 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 RNU4-49P-201ENST00000516080 140 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 MIR4790-201ENST00000577799 79 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SLC28A1O00337 AC018638.8-201ENST00000588755 281 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.53□□□□□ -2.16
SLC28A1O00337 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.53□□□□□ -2.16
SLC28A1O00337 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.53□□□□□ -2.16
SLC28A1O00337 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
SLC28A1O00337 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SLC28A1O00337 RNU1-62P-201ENST00000362599 164 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 RNU6-280P-201ENST00000364145 104 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 RNU4-42P-201ENST00000364738 142 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SLC28A1O00337 RNU6-174P-201ENST00000410406 106 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 RNA5SP504-201ENST00000410676 117 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC28A1O00337 AC008134.1-201ENST00000420943 193 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AL445305.1-201ENST00000432577 575 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC28A1O00337 RN7SKP210-201ENST00000459176 261 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 RPL26P26-201ENST00000480251 434 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AC134698.4-201ENST00000523451 826 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AL590705.4-201ENST00000532209 134 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.52□□□□□ -2.17
SLC28A1O00337 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC28A1O00337 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC28A1O00337 AL158827.2-201ENST00000602494 330 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 MIR6845-201ENST00000613182 61 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AC139792.2-201ENST00000624218 587 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 AL691447.3-201ENST00000635020 330 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.52□□□□□ -2.17
SLC28A1O00337 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms