Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC009248.2-201ENST00000619826 254 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AC098679.4-201ENST00000624241 654 ntBASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.5□□□□□ -2.17
SMIM28A0A1B0GU29 AL391987.6-201ENST00000305671 199 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.301-201ENST00000364990 103 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP100-201ENST00000410903 110 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP59-201ENST00000410922 110 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 FCF1P9-201ENST00000412546 282 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AC009161.1-201ENST00000417306 376 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP454-201ENST00000517231 127 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 HSBP1P1-201ENST00000555205 166 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 AC018638.8-201ENST00000588755 281 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 MTND5P9-201ENST00000503854 1755 ntBASIC1.49□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.4-201ENST00000362333 112 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-418P-201ENST00000384035 107 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-1026P-201ENST00000384465 108 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP504-201ENST00000410676 117 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 EIF1P1-201ENST00000421436 341 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AL445305.1-201ENST00000432577 575 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 MTATP6P13-201ENST00000438531 667 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AL353572.1-201ENST00000442490 417 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC007215.1-201ENST00000464893 276 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 HMGN2P9-201ENST00000476875 229 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC010409.1-201ENST00000487382 476 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 RPL30P10-201ENST00000488148 337 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC097473.1-201ENST00000508142 408 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC026470.2-201ENST00000561492 181 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 MIR4742-201ENST00000581069 85 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 MIR5006-201ENST00000583027 110 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC060780.3-201ENST00000589464 80 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC124303.1-201ENST00000605703 360 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC019193.3-201ENST00000609144 554 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 AC002553.4-201ENST00000616896 331 ntBASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SMIM28A0A1B0GU29 ZNF204P-201ENST00000416749 2397 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.473-201ENST00000384333 102 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 Y_RNA.505-201ENST00000384489 102 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 MIR1283-1-201ENST00000408494 87 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC243428.1-201ENST00000421099 264 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 MTCO3P46-201ENST00000425787 232 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC099677.2-201ENST00000436385 175 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 HSPE1P21-201ENST00000438283 308 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC009237.7-201ENST00000447357 229 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 RNA5SP57-201ENST00000459463 123 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC027575.1-201ENST00000481064 460 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 RNU6-566P-201ENST00000516790 107 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC005786.1-201ENST00000588553 154 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 AC080078.2-201ENST00000603766 501 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 RPL17P51-201ENST00000605218 238 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 TCL6_2.1-201ENST00000615162 119 ntBASIC1.47□□□□□ -2.17
SMIM28A0A1B0GU29 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 CBX3P1-201ENST00000325243 554 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.164-201ENST00000363709 102 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-842P-201ENST00000384269 107 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.533-201ENST00000384596 114 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 USP9YP30-201ENST00000430729 455 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AC016717.1-201ENST00000448918 286 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 FGF7P6-202ENST00000451282 293 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 MTND5P5-201ENST00000503764 376 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 ACA59.1-201ENST00000515966 143 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-856P-201ENST00000516959 98 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AP003033.1-201ENST00000527244 415 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms