Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 RNU6-163P-201ENST00000384396 106 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MIR32-201ENST00000384965 70 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MIR660-201ENST00000385235 97 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 C1DP2-201ENST00000418167 426 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 RPL31P35-201ENST00000431058 377 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC000111.3-201ENST00000433478 193 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 C1DP4-201ENST00000455429 424 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 U7.7-201ENST00000459276 60 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC010587.1-201ENST00000505809 469 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 RNU6-123P-201ENST00000516163 102 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 RNU6-947P-201ENST00000516264 106 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MTND3P19-201ENST00000603825 345 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC100812.1-201ENST00000607622 580 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC106754.2-201ENST00000623006 233 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MIR1253-201ENST00000408273 105 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC093019.1-201ENST00000443135 252 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC074290.1-201ENST00000448883 135 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 HMGB1P29-201ENST00000505659 499 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC022878.1-201ENST00000530684 149 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AL391840.1-201ENST00000571144 367 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 Z99497.2-201ENST00000603634 310 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 AC011155.2-201ENST00000623202 216 ntBASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN8AQ9UQD0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 RNY4P16-201ENST00000364768 94 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 Y_RNA.576-201ENST00000384781 102 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 RNA5SP323-201ENST00000391094 133 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 MTND3P17-201ENST00000416968 344 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AC090960.1-201ENST00000421072 306 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 BET1P1-201ENST00000482276 359 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 RNU6-948P-201ENST00000516374 107 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AP003168.1-201ENST00000530091 307 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AC103996.1-201ENST00000555468 102 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AL360085.1-201ENST00000604713 532 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AL158211.2-201ENST00000607282 395 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 7SK.10-201ENST00000621414 298 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AL603839.4-201ENST00000624658 1005 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 AL445984.1-201ENST00000637834 659 ntBASIC0.22□□□□□ -2.37
SCN8AQ9UQD0 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 SNORA75.2-201ENST00000391138 150 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 SNORA75.3-201ENST00000391231 150 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 STAG3L5P-204ENST00000443759 179 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 SNORA25.17-201ENST00000517184 124 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 MTND4LP26-201ENST00000518144 282 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 EIF1P4-201ENST00000572664 335 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AL359075.3-201ENST00000613288 217 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 MIR6759-201ENST00000638110 65 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 RNU6-336P-201ENST00000364891 107 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 MIR891A-201ENST00000401237 79 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 MRPL42P2-201ENST00000403169 426 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AL355796.1-201ENST00000406706 323 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 RNA5SP504-201ENST00000410676 117 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AC091435.1-201ENST00000505442 584 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AC004223.2-201ENST00000590309 544 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 snoZ196.1-201ENST00000625269 89 ntBASIC0.21□□□□□ -2.38
SCN8AQ9UQD0 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 RNU6-39P-201ENST00000384344 107 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC010975.2-201ENST00000427781 588 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC002429.1-201ENST00000437672 148 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC079382.1-201ENST00000493346 557 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 SNORA19.3-201ENST00000516165 130 ntBASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.2□□□□□ -2.38
SCN8AQ9UQD0 Y_RNA.18-201ENST00000362461 102 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 Y_RNA.294-201ENST00000364916 102 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 Y_RNA.458-201ENST00000384240 102 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 SNORA24.1-201ENST00000384401 135 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC119618.1-201ENST00000434191 222 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC009237.7-201ENST00000447357 229 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 MTCO2P6-201ENST00000463134 685 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AL163973.1-201ENST00000484753 577 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC005771.1-201ENST00000585581 349 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC004832.4-201ENST00000608952 331 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 AC013437.2-201ENST00000639587 677 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 RNU4-92P-201ENST00000363783 136 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.19□□□□□ -2.38
SCN8AQ9UQD0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms