Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MTND3P16-201ENST00000452205 344 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 RNU6-189P-201ENST00000516120 101 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 RNU6-612P-201ENST00000516909 102 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC092954.2-201ENST00000609103 430 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AL353149.1-201ENST00000610667 244 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC103705.1-201ENST00000619013 241 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 AC048344.4-201ENST00000619744 527 ntBASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
KLHL28Q9NXS3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-418P-201ENST00000384035 107 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.559-201ENST00000384686 107 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU2-16P-201ENST00000410712 136 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1068P-201ENST00000410958 103 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC060773.1-201ENST00000421698 310 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 MTATP6P26-201ENST00000445926 662 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC107401.1-201ENST00000503426 685 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC091435.1-201ENST00000505442 584 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC011406.1-201ENST00000512440 370 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU2-34P-201ENST00000516534 121 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.704-201ENST00000516851 102 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC104576.1-201ENST00000524225 88 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC025423.5-201ENST00000550230 219 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 MIR3937-201ENST00000580135 106 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AP003465.2-201ENST00000602571 373 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AC092807.2-201ENST00000609367 243 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 AL359880.1-201ENST00000621879 266 ntBASIC1.25□□□□□ -2.21
KLHL28Q9NXS3 RNU6-227P-201ENST00000362865 103 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.194-201ENST00000363985 102 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.372-201ENST00000365599 102 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 MIR1283-1-201ENST00000408494 87 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 CST2P1-201ENST00000425770 87 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 TIMM9P3-201ENST00000428659 274 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 snoU13.6-201ENST00000458785 104 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 RPS29P27-201ENST00000463711 170 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AC019235.1-201ENST00000503847 207 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 RNA5SP384-201ENST00000516615 116 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 RNU6-323P-201ENST00000521915 107 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 MIR5692C1-201ENST00000585309 91 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AL078604.3-201ENST00000615580 211 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AC126177.8-201ENST00000618339 1015 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 BX322639.1-202ENST00000423987 2213 ntBASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KLHL28Q9NXS3 RNU6-82P-201ENST00000363970 107 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 MIR514A2-201ENST00000385131 88 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 MIR514A3-201ENST00000385132 88 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.693-201ENST00000516641 110 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AC019176.1-201ENST00000518519 225 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AC024909.2-201ENST00000553035 286 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AL512360.1-201ENST00000555346 234 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AC080013.6-201ENST00000606185 215 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AL357078.3-201ENST00000607528 618 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 AC005562.2-201ENST00000618264 111 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 MTND5P35-201ENST00000557537 1720 ntBASIC1.23□□□□□ -2.21
KLHL28Q9NXS3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-522P-201ENST00000364497 107 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU4-24P-201ENST00000364565 139 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-483P-201ENST00000384088 108 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 MRPL35P1-201ENST00000404272 572 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 MTND3P9-201ENST00000429526 346 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 snoU13.27-201ENST00000459278 104 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RPL31P58-201ENST00000469001 379 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AC083904.1-201ENST00000487828 231 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AC092436.3-201ENST00000511788 257 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms