Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 MRPL42P3-201ENST00000401492 326 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.592-201ENST00000410274 109 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 MIR449C-201ENST00000516047 92 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 SCARNA15.1-201ENST00000516384 125 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 RNU6-58P-201ENST00000517143 103 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 AC023442.1-201ENST00000531247 422 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 AC027288.2-201ENST00000553028 243 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 AC016727.2-201ENST00000603988 621 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 SNORD58B-201ENST00000607313 66 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 U2.1-201ENST00000618978 145 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 MIR5739-201ENST00000619803 80 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 AL606534.2-204ENST00000635008 178 ntBASIC2.29□□□□□ -2.04
PCDH9Q9HC56 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDH9Q9HC56 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 RNU6-944P-201ENST00000364023 107 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 RNU6-879P-201ENST00000364328 108 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 RNA5SP201-201ENST00000410316 124 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 EIF4A1P12-201ENST00000551910 141 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC090517.1-201ENST00000569307 266 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC090617.3-201ENST00000573670 475 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC022432.1-201ENST00000595739 310 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC005296.1-201ENST00000616145 209 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC138305.3-201ENST00000624988 240 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 MIR4272-201ENST00000635924 64 ntBASIC2.28□□□□□ -2.04
PCDH9Q9HC56 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCDH9Q9HC56 AC005592.1-201ENST00000566527 1640 ntBASIC2.28□□□□□ -2.05
PCDH9Q9HC56 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.27□□□□□ -2.05
PCDH9Q9HC56 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.424-201ENST00000384063 103 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 RNU6-639P-201ENST00000384074 107 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 RNU6-708P-201ENST00000384217 107 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.27□□□□□ -2.05
PCDH9Q9HC56 AC080013.2-201ENST00000460866 323 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDH9Q9HC56 RNU6-965P-201ENST00000516721 96 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 RNU6-1198P-201ENST00000516904 67 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 MIR5188-201ENST00000583467 113 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 SNORD14A-201ENST00000606526 91 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 AC005520.5-201ENST00000613926 164 ntBASIC2.27□□□□□ -2.05
PCDH9Q9HC56 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDH9Q9HC56 RNU6-450P-201ENST00000364654 107 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 SNORA18.2-201ENST00000383865 132 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.527-201ENST00000384573 102 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 MIR606-201ENST00000384851 96 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 MIR10B-201ENST00000385011 110 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 RNU6-159P-201ENST00000391080 106 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AL161788.1-201ENST00000441805 169 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 SNORA25.14-201ENST00000516481 132 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 RNU6-1137P-201ENST00000517073 99 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AP002770.2-201ENST00000543613 532 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 MIR4435-1-201ENST00000582552 80 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AC006504.6-201ENST00000590142 199 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 VN1R91P-201ENST00000594377 169 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AL355297.2-201ENST00000604792 129 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.26□□□□□ -2.05
PCDH9Q9HC56 AC008121.3-201ENST00000618726 433 ntBASIC2.26□□□□□ -2.05
PCDH9Q9HC56 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.162-201ENST00000363683 102 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNU6-873P-201ENST00000363833 107 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNU1-91P-201ENST00000364746 163 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNA5SP125-201ENST00000364843 120 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 Y_RNA.389-201ENST00000383924 113 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNU2-63P-201ENST00000410792 194 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RPS26P42-201ENST00000413485 326 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDH9Q9HC56 MTCO3P8-201ENST00000453691 755 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 AC107032.1-201ENST00000485945 480 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 AC132942.1-201ENST00000486753 483 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNU6-1114P-201ENST00000516022 107 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
PCDH9Q9HC56 RNA5SP54-201ENST00000516951 92 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms