Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Z82205.1-201ENST00000428456 297 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AC108667.1-201ENST00000428618 249 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AL035666.1-201ENST00000446195 348 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 SNORD5.1-201ENST00000458800 75 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AL109918.3-201ENST00000603072 338 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AC016727.2-201ENST00000603988 621 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.73□□□□□ -2.13
RNF41Q9H4P4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
RNF41Q9H4P4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.73□□□□□ -2.13
RNF41Q9H4P4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 MIR29C-201ENST00000385231 88 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 SNORA40.19-201ENST00000390846 128 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC004866.1-201ENST00000411748 78 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 USP9YP30-201ENST00000430729 455 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC087477.1-201ENST00000465747 340 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC046134.1-201ENST00000514454 666 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 MIR3124-201ENST00000582636 67 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC011712.1-201ENST00000588959 234 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AP000942.3-201ENST00000603702 160 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 RPL17P51-201ENST00000605218 238 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AL022345.1-201ENST00000607292 135 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AL512598.1-201ENST00000610158 273 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC093913.1-201ENST00000614178 329 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 AC005296.1-201ENST00000616145 209 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 SCARNA4-201ENST00000629045 128 ntBASIC1.72□□□□□ -2.13
RNF41Q9H4P4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.72□□□□□ -2.13
RNF41Q9H4P4 RNU6-845P-201ENST00000362578 103 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 SNORA18.2-201ENST00000383865 132 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.390-201ENST00000383932 102 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 MIR549A-201ENST00000385268 96 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AL353689.1-201ENST00000438895 199 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 RPL23AP3-201ENST00000453844 468 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 FO393415.2-201ENST00000480085 343 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 RNA5SP490-201ENST00000517141 136 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AC090517.1-201ENST00000569307 266 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 MIR4790-201ENST00000577799 79 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
RNF41Q9H4P4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
RNF41Q9H4P4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 CBX3P1-201ENST00000325243 554 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 U8.1-201ENST00000362843 134 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 SNORD115-3-201ENST00000363100 82 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 SNORD31B-201ENST00000364977 69 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 RNU6-767P-201ENST00000384132 107 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AL357139.1-201ENST00000407792 426 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 PDCL2P1-201ENST00000419302 352 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC243428.1-201ENST00000421099 264 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC026782.1-201ENST00000512952 449 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 ACA59.1-201ENST00000515966 143 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 RNU7-30P-201ENST00000516835 62 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF41Q9H4P4 MIR3169-201ENST00000578032 83 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 MIR6128-201ENST00000615528 109 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 AC022306.2-201ENST00000617563 647 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 MTND5P9-201ENST00000503854 1755 ntBASIC1.7□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.160-201ENST00000363677 92 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 SNORD115-8-201ENST00000363856 82 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.184-201ENST00000363884 108 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 RNA5SP493-201ENST00000364115 91 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 SNORD115-38-201ENST00000365037 82 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 MTCO1P44-201ENST00000441935 243 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC245102.2-201ENST00000448956 180 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC016925.1-201ENST00000458303 298 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 RMST_6.1-201ENST00000611980 203 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms